RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 SENP7Q9BQF6 1050 aa10.08□□□□□ -0.8
RNF4-203ENST00000503123 UPF3BQ9BZI7 483 aaKnown RBP10.08□□□□□ -0.8
RNF4-203ENST00000503123 GRIN2DO15399 1336 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 TRIM43BA6NCK2 446 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 SPATA31C2B4DYI2 1134 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 MAFGO15525 162 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 FIBPO43427 364 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 UBA1P22314 1058 aaKnown RBP10.07□□□□□ -0.8
RNF4-203ENST00000503123 CLK2P49760 499 aaKnown RBP10.07□□□□□ -0.8
RNF4-203ENST00000503123 ADCY7P51828 1080 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 AKAP17AQ02040 695 aaKnown RBP10.07□□□□□ -0.8
RNF4-203ENST00000503123 AP3B2Q13367 1082 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 ANKRD1Q15327 319 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 DGKDQ16760 1214 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 CELF3Q5SZQ8 465 aaKnown RBP10.07□□□□□ -0.8
RNF4-203ENST00000503123 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 DHX37Q8IY37 1157 aaKnown RBP10.07□□□□□ -0.8
RNF4-203ENST00000503123 TDHQ8IZJ6 230 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 GIMAP8Q8ND71 665 aaPredicted RBP10.07□□□□□ -0.8
RNF4-203ENST00000503123 AFG1LQ8WV93 481 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 TRIM43Q96BQ3 446 aaPredicted RBP10.07□□□□□ -0.8
RNF4-203ENST00000503123 GPRASP2Q96D09 838 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 UBE2OQ9C0C9 1292 aaKnown RBP10.07□□□□□ -0.8
RNF4-203ENST00000503123 ZMYND12Q9H0C1 365 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 PRDM5Q9NQX1 630 aaPredicted RBP10.07□□□□□ -0.8
RNF4-203ENST00000503123 PDRG1Q9NUG6 133 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 TMEM39AQ9NV64 488 aa10.07□□□□□ -0.8
RNF4-203ENST00000503123 PTPRSQ13332 1948 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 SIP14410 1827 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 SMCO2A6NFE2 343 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 PPFIA4O75335 1185 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 GGPS1O95749 300 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 TIMP1P01033 207 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 MYL3P08590 195 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 SUPT20HL2P0C7V6 817 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 RAG1P15918 1043 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 FXR1P51114 621 aaKnown RBP eCLIP10.06□□□□□ -0.8
RNF4-203ENST00000503123 MDM2Q00987 491 aaPredicted RBP10.06□□□□□ -0.8
RNF4-203ENST00000503123 NEDD9Q14511 834 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 PKN1Q16512 942 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 CPLX2Q6PUV4 134 aaKnown RBP10.06□□□□□ -0.8
RNF4-203ENST00000503123 SH3RF1Q7Z6J0 888 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 NLRX1Q86UT6 975 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 SESTD1Q86VW0 696 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 CCDC148Q8NFR7 591 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 KATNAL1Q9BW62 490 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 SH3GLB2Q9NR46 395 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 PCDHA6Q9UN73 950 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 PCDHA8Q9Y5H6 950 aa10.06□□□□□ -0.8
RNF4-203ENST00000503123 CPLX1O14810 134 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 B4GALT4O60513 344 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 F2P00734 622 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 GNA11P29992 359 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 SREBF1P36956 1147 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 PSMC6P62333 389 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 CCT2P78371 535 aaKnown RBP10.05□□□□□ -0.8
RNF4-203ENST00000503123 SP2Q02086 613 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 SEMA3FQ13275 785 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 UBE2SQ16763 222 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 NBPF20Q3BBV1 942 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 LRIT3Q3SXY7 679 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 MFSD5Q6N075 450 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 GPR153Q6NV75 609 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 METTL7BQ6UX53 244 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 BICD2Q8TD16 824 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 BADQ92934 168 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 PHKBQ93100 1093 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 NCOA5Q9HCD5 579 aaKnown RBP10.05□□□□□ -0.8
RNF4-203ENST00000503123 C6orf50Q9HD87 102 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 UBIAD1Q9Y5Z9 338 aa10.05□□□□□ -0.8
RNF4-203ENST00000503123 HAS3O00219 553 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 PFKFB2O60825 505 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 CDKL5O76039 1030 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 DEXIO95424 95 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 ITGB5P18084 799 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 ITGB8P26012 769 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 FPGSQ05932 587 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 SSRP1Q08945 709 aaKnown RBP10.04□□□□□ -0.8
RNF4-203ENST00000503123 MTMR1Q13613 665 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 HSDL1Q3SXM5 330 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 C8orf34Q49A92 452 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 NIPA1Q7RTP0 329 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 REXO1Q8N1G1 1221 aaKnown RBP10.04□□□□□ -0.8
RNF4-203ENST00000503123 CRYGNQ8WXF5 182 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 KAT2BQ92831 832 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 SPATA33Q96N06 139 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 SLC26A6Q9BXS9 759 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 ANO3Q9BYT9 981 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 MLXIPQ9HAP2 919 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 RTEL1Q9NZ71 1219 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 STK36Q9NRP7 1315 aa10.04□□□□□ -0.8
RNF4-203ENST00000503123 PITPNM1O00562 1244 aa10.03□□□□□ -0.8
RNF4-203ENST00000503123 NOP56O00567 594 aaKnown RBP10.03□□□□□ -0.8
RNF4-203ENST00000503123 SEC24BO95487 1268 aa10.03□□□□□ -0.8
RNF4-203ENST00000503123 CYP3A4P08684 503 aa10.03□□□□□ -0.8
RNF4-203ENST00000503123 KCNA2P16389 499 aa10.03□□□□□ -0.8
RNF4-203ENST00000503123 PPIGQ13427 754 aaKnown RBP eCLIP10.03□□□□□ -0.84e-10■■□□□ 12.4
RNF4-203ENST00000503123 CEP55Q53EZ4 464 aa10.03□□□□□ -0.8
RNF4-203ENST00000503123 GALNT17Q6IS24 598 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms