RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CELF3Q5SZQ8 465 aaKnown RBP7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 IFIT1BQ5T764 474 aaKnown RBP7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 XRRA1Q6P2D8 792 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 TRAF7Q6Q0C0 670 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 CWC27Q6UX04 472 aaKnown RBP7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 SEPT14Q6ZU15 432 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 RPAINQ86UA6 219 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 SERINC5Q86VE9 423 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 SP7Q8TDD2 431 aaPredicted RBP7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 TBC1D5Q92609 795 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 DHX38Q92620 1227 aaKnown RBP7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 HLA-CQ95604 372 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 SAMD11Q96NU1 681 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 ZKSCAN3Q9BRR0 538 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 UBAC1Q9BSL1 405 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 C16orf70Q9BSU1 422 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 USP26Q9BXU7 913 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 FTOQ9C0B1 505 aaKnown RBP eCLIP7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 UBA5Q9GZZ9 404 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 DIAPH3Q9NSV4 1193 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 MAD2L2Q9UI95 211 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 MRVI1Q9Y6F6 885 aa7.1□□□□□ -1.27
LSM3P4-201ENST00000502948 KLRF2D3W0D1 207 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 PIK3CDO00329 1044 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 LGR5O75473 907 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 RPLP2P05387 115 aaKnown RBP7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 TROAPQ12815 778 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 GRB10Q13322 594 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 NEDD9Q14511 834 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 CCDC85BQ15834 202 aaPredicted RBP7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 PUS10Q3MIT2 529 aaKnown RBP7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 GNPTABQ3T906 1256 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 PLEKHG4Q58EX7 1191 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 DHX37Q8IY37 1157 aaKnown RBP7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 PPM1EQ8WY54 764 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 APBB2Q92870 758 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 CHMP4CQ96CF2 233 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 INPP4AQ96PE3 977 aaPredicted RBP7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 TGS1Q96RS0 853 aaKnown RBP7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 SENP7Q9BQF6 1050 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 HDAC6Q9UBN7 1215 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 INSL6Q9Y581 213 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 PCDHA1Q9Y5I3 950 aa7.09□□□□□ -1.27
LSM3P4-201ENST00000502948 PNMA6FA0A0J9YX94 578 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 LINC01553A4QN01 128 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 EPOPA6NHQ4 379 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 SPATA31C2B4DYI2 1134 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 H3BRB1 525 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 GCOM1H8Y6P7 765 aaPredicted RBP7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 MAFGO15525 162 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 GPR37L1O60883 481 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 PPP1R11O60927 126 aaPredicted RBP7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 CFBP00751 764 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 POLR2MP0CAP2 368 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 GNAT1P11488 350 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 CCND2P30279 289 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 ADAM17P78536 824 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 TRDNQ13061 729 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 GRM4Q14833 912 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 COL19A1Q14993 1142 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 HSDL1Q3SXM5 330 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 FAM26DQ5JW98 314 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 ZNF618Q5T7W0 954 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 METTL7BQ6UX53 244 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 STAG2Q8N3U4 1231 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 GIMAP8Q8ND71 665 aaPredicted RBP7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 RUFY2Q8WXA3 655 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 SPATA33Q96N06 139 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 CPVLQ9H3G5 476 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 TUT1Q9H6E5 874 aaKnown RBP7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 SUGCTQ9HAC7 445 aa7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 U3KPZ7 1027 aaPredicted RBP7.08□□□□□ -1.28
LSM3P4-201ENST00000502948 BDP1A6H8Y1 2624 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 DOCK5Q9H7D0 1870 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 ERICH2A1L162 156 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 C17orf102A2RUQ5 167 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 RSPH10B2B2RC85 870 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 FIBPO43427 364 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 NCK2O43639 380 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 CYTH3O43739 400 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 DHX16O60231 1041 aaKnown RBP7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 ARHGEF15O94989 841 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 GGPS1O95749 300 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 IGHDP01880 384 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 AMHP03971 560 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 CYP21A2P08686 494 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 RSPH10BP0C881 870 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 EIF2AK2P19525 551 aaKnown RBP7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 UBA1P22314 1058 aaKnown RBP7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 PLA2G5P39877 138 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 KCNQ1P51787 676 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 SP2Q02086 613 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 TFF2Q03403 129 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 MBTPS1Q14703 1052 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 SART3Q15020 963 aaKnown RBP7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 LEXMQ3ZCV2 418 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 NCOA7Q8NI08 942 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 ARNTL2Q8WYA1 636 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 TOP1MTQ969P6 601 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 CDHR1Q96JP9 859 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms