RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 USP15Q9Y4E8 981 aaPredicted RBP6□□□□□ -1.45
HTT-202ENST00000502820 ZFHX4Q86UP3 3567 aa6□□□□□ -1.45
HTT-202ENST00000502820 SIPA1L1O43166 1804 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 NCOR1O75376 2440 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 ZFHX2Q9C0A1 2572 aaPredicted RBP5.99□□□□□ -1.45
HTT-202ENST00000502820 GBF1Q92538 1859 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 PTPDC1A2A3K4 754 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 GOLIM4O00461 696 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 PER2O15055 1255 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 EFCAB14O75071 495 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 LGR5O75473 907 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 NDUFB10O96000 172 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 IGHDP01880 384 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 CTSHP09668 335 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 ZSCAN20P17040 1043 aaPredicted RBP5.99□□□□□ -1.45
HTT-202ENST00000502820 RFX1P22670 979 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 CALML3P27482 149 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 THPOP40225 353 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 NRIP1P48552 1158 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 PDE4DQ08499 809 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 COL9A3Q14050 684 aaPredicted RBP5.99□□□□□ -1.45
HTT-202ENST00000502820 GPNMBQ14956 572 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 PPP2R5BQ15173 497 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 RABEP1Q15276 862 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 PTPN21Q16825 1174 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 RSPO4Q2I0M5 234 aaPredicted RBP5.99□□□□□ -1.45
HTT-202ENST00000502820 DUSP28Q4G0W2 176 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 ZNF618Q5T7W0 954 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 SLC9C2Q5TAH2 1124 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 NFRKBQ6P4R8 1299 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 LRRC47Q8N1G4 583 aaKnown RBP5.99□□□□□ -1.45
HTT-202ENST00000502820 LCORLQ8N3X6 602 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 DCLK2Q8N568 766 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 KREMEN2Q8NCW0 462 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 CAGE1Q8TC20 777 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 PPP2R3CQ969Q6 453 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 HAUS7Q99871 368 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 PHF7Q9BWX1 381 aaPredicted RBP5.99□□□□□ -1.45
HTT-202ENST00000502820 LRRCC1Q9C099 1032 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 GZF1Q9H116 711 aaPredicted RBP5.99□□□□□ -1.45
HTT-202ENST00000502820 SMOC2Q9H3U7 446 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 DCP1AQ9NPI6 582 aaPredicted RBP5.99□□□□□ -1.45
HTT-202ENST00000502820 Q9Y3F1 56 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 R3HCC1Q9Y3T6 440 aaKnown RBP5.99□□□□□ -1.45
HTT-202ENST00000502820 PCDHGC5Q9Y5F6 944 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 R4GN57 208 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 ZNF236Q9UL36 1845 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 ZNF532Q9HCE3 1301 aa5.99□□□□□ -1.45
HTT-202ENST00000502820 MINDY4BA8MYZ0 360 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 LOC730098B7Z3J9 87 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 TMEM232C9JQI7 657 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 SMARCA5O60264 1052 aaPredicted RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 LMNAP02545 664 aaKnown RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 TXNP10599 105 aaKnown RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 CDK11BP21127 795 aaKnown RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 CA8P35219 290 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 ADD2P35612 726 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 NKX3-2P78367 333 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 ZNF200P98182 395 aaPredicted RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 SLFNL1Q499Z3 407 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 MUM1L1Q5H9M0 696 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 LLGL2Q6P1M3 1020 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 LRSAM1Q6UWE0 723 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 ADGRD2Q7Z7M1 963 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 CYP2W1Q8TAV3 490 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 RIN2Q8WYP3 895 aaPredicted RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 DHX38Q92620 1227 aaKnown RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 IL17RAQ96F46 866 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 CCDC17Q96LX7 622 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 DNAJC2Q99543 621 aaKnown RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 C11orf84Q9BUA3 381 aaPredicted RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 BOLA2Q9H3K6 86 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 DCTPP1Q9H773 170 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 SLC38A10Q9HBR0 1119 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 VTA1Q9NP79 307 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 SH2B1Q9NRF2 756 aaPredicted RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 PAG1Q9NWQ8 432 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 HDAC6Q9UBN7 1215 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 FEM1BQ9UK73 627 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 PCDHB15Q9Y5E8 787 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 COL4A4P53420 1690 aaPredicted RBP5.98□□□□□ -1.45
HTT-202ENST00000502820 SMCHD1A6NHR9 2005 aa5.98□□□□□ -1.45
HTT-202ENST00000502820 RSPH10B2B2RC85 870 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 KPNA6O60684 536 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 PARNO95453 639 aaKnown RBP5.97□□□□□ -1.45
HTT-202ENST00000502820 SEC24BO95487 1268 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 CHGBP05060 677 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 RSPH10BP0C881 870 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 PDIA4P13667 645 aaKnown RBP5.97□□□□□ -1.45
HTT-202ENST00000502820 ICAM3P32942 547 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 MCM2P49736 904 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 PTPN11Q06124 597 aaPredicted RBP5.97□□□□□ -1.45
HTT-202ENST00000502820 ADAM15Q13444 863 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 MTMR3Q13615 1198 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 BAATQ14032 418 aaPredicted RBP5.97□□□□□ -1.45
HTT-202ENST00000502820 BTG3Q14201 252 aaPredicted RBP5.97□□□□□ -1.45
HTT-202ENST00000502820 ACAP1Q15027 740 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 UBE3CQ15386 1083 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 ANGPT1Q15389 498 aa5.97□□□□□ -1.45
HTT-202ENST00000502820 CTC1Q2NKJ3 1217 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms