RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 HDAC6Q9UBN7 1215 aa10.43□□□□□ -0.74
COPB2-202ENST00000502734 GTF2IRD1Q9UHL9 959 aa10.43□□□□□ -0.74
COPB2-202ENST00000502734 SCN10AQ9Y5Y9 1956 aa10.43□□□□□ -0.74
COPB2-202ENST00000502734 BAZ2BQ9UIF8 2168 aaKnown RBP10.42□□□□□ -0.74
COPB2-202ENST00000502734 LRRC37A2A6NM11 1700 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 CCDC69A6NI79 296 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 KIF28PB7ZC32 967 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 HAS3O00219 553 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 PRC1O43663 620 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 SORBS3O60504 671 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 DDAH1O94760 285 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 PARNO95453 639 aaKnown RBP10.42□□□□□ -0.74
COPB2-202ENST00000502734 GGPS1O95749 300 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 MYOGP15173 224 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 SELPP16109 830 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 IGFBP4P22692 258 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 GNAQP50148 359 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 MFSD10Q14728 455 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 NFXL1Q6ZNB6 911 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 ZNF654Q8IZM8 581 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 IL31RAQ8NI17 732 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 AFAP1L1Q8TED9 768 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 PPM1EQ8WY54 764 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 CUL5Q93034 780 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 RRP36Q96EU6 259 aaKnown RBP10.42□□□□□ -0.74
COPB2-202ENST00000502734 TMEM87BQ96K49 555 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 CTAGE1Q96RT6 745 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 ESYT1Q9BSJ8 1104 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 SPZ1Q9BXG8 430 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 CUL9Q8IWT3 2517 aa10.42□□□□□ -0.74
COPB2-202ENST00000502734 SPATA31C2B4DYI2 1134 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 SH2B2O14492 632 aaPredicted RBP10.41□□□□□ -0.74
COPB2-202ENST00000502734 SLC27A2O14975 620 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 STAM2O75886 525 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 F2P00734 622 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 CKBP12277 381 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 HOXD8P13378 290 aaPredicted RBP10.41□□□□□ -0.74
COPB2-202ENST00000502734 LIFRP42702 1097 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 MRPS9P82933 396 aaKnown RBP10.41□□□□□ -0.74
COPB2-202ENST00000502734 PTK7Q13308 1070 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 ADGRE1Q14246 886 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 NEDD9Q14511 834 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 GPNMBQ14956 572 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 NECTIN1Q15223 517 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 HSDL1Q3SXM5 330 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 GNPTABQ3T906 1256 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 PPP2R2DQ66LE6 453 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 CREB3L3Q68CJ9 461 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 SRBD1Q8N5C6 995 aaKnown RBP10.41□□□□□ -0.74
COPB2-202ENST00000502734 SMARCC2Q8TAQ2 1214 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 SYMPKQ92797 1274 aaKnown RBP10.41□□□□□ -0.74
COPB2-202ENST00000502734 GPKOWQ92917 476 aaPredicted RBP eCLIP10.41□□□□□ -0.74
COPB2-202ENST00000502734 SLC9A7Q96T83 725 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 MYL10Q9BUA6 226 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 RTEL1Q9NZ71 1219 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 SEC63Q9UGP8 760 aaKnown RBP10.41□□□□□ -0.74
COPB2-202ENST00000502734 LAMA4Q16363 1823 aa10.41□□□□□ -0.74
COPB2-202ENST00000502734 BAIAP3O94812 1187 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 ZNF286BP0CG31 522 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 CALM1P0DP23 149 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 CALM2P0DP24 149 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 CALM3P0DP25 149 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 UBA1P22314 1058 aaKnown RBP10.4□□□□□ -0.74
COPB2-202ENST00000502734 ICAM3P32942 547 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 ZNF200P98182 395 aaPredicted RBP10.4□□□□□ -0.74
COPB2-202ENST00000502734 RBL2Q08999 1139 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 CCDC85BQ15834 202 aaPredicted RBP10.4□□□□□ -0.74
COPB2-202ENST00000502734 XRRA1Q6P2D8 792 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 USP17L6PQ6QN14 398 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 LRRC8DQ7L1W4 858 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 USP38Q8NB14 1042 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 DHX38Q92620 1227 aaKnown RBP10.4□□□□□ -0.74
COPB2-202ENST00000502734 INPP4AQ96PE3 977 aaPredicted RBP10.4□□□□□ -0.74
COPB2-202ENST00000502734 C16orf70Q9BSU1 422 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 USP26Q9BXU7 913 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 BCAS3Q9H6U6 928 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 PSTPIP2Q9H939 334 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 ANO2Q9NQ90 1003 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 SLC12A7Q9Y666 1083 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 CHD9Q3L8U1 2897 aa10.4□□□□□ -0.74
COPB2-202ENST00000502734 VCANP13611 3396 aa10.4□□□□□ -0.75
COPB2-202ENST00000502734 H3BRB1 525 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 PIK3CDO00329 1044 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 NOP56O00567 594 aaKnown RBP10.39□□□□□ -0.75
COPB2-202ENST00000502734 MEIS2O14770 477 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 PLEKHA8P1O95397 391 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 CXCL10P02778 98 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 CA3P07451 260 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 KCNJ6P48051 423 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 SYNE3Q6ZMZ3 975 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 CYFIP1Q7L576 1253 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 NLRX1Q86UT6 975 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 HERC6Q8IVU3 1022 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 CMTR1Q8N1G2 835 aaKnown RBP10.39□□□□□ -0.75
COPB2-202ENST00000502734 FANCBQ8NB91 859 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 SENP7Q9BQF6 1050 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 TUT1Q9H6E5 874 aaKnown RBP10.39□□□□□ -0.75
COPB2-202ENST00000502734 MYH6P13533 1939 aa10.39□□□□□ -0.75
COPB2-202ENST00000502734 FRMPD4Q14CM0 1322 aa10.38□□□□□ -0.75
COPB2-202ENST00000502734 ABHD14A-ACY1A0A1B0GW23 586 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms