RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 CTAGE1Q96RT6 745 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 RIOX1Q9H6W3 641 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 MLXIPQ9HAP2 919 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 MAP3K20Q9NYL2 800 aaKnown RBP12.78□□□□□ -0.36
LSAMP-206ENST00000498645 THEGQ9P2T0 379 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 GTF2IRD1Q9UHL9 959 aa12.78□□□□□ -0.36
LSAMP-206ENST00000498645 PNMA6FA0A0J9YX94 578 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 RFXAPO00287 272 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 F2P00734 622 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 CKBP12277 381 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 UBA1P22314 1058 aaKnown RBP12.77□□□□□ -0.37
LSAMP-206ENST00000498645 TROAPQ12815 778 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 HSDL1Q3SXM5 330 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 CELF3Q5SZQ8 465 aaKnown RBP12.77□□□□□ -0.37
LSAMP-206ENST00000498645 MYSM1Q5VVJ2 828 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 KCNV1Q6PIU1 500 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 NFXL1Q6ZNB6 911 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 TMCO2Q7Z6W1 182 aaPredicted RBP12.77□□□□□ -0.37
LSAMP-206ENST00000498645 VSIG10LQ86VR7 867 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 HERC6Q8IVU3 1022 aa12.77□□□□□ -0.37
LSAMP-206ENST00000498645 MB21D2Q8IYB1 491 aaPredicted RBP12.77□□□□□ -0.37
LSAMP-206ENST00000498645 SYMPKQ92797 1274 aaKnown RBP12.77□□□□□ -0.37
LSAMP-206ENST00000498645 PRRC2BQ5JSZ5 2229 aaKnown RBP12.76□□□□□ -0.37
LSAMP-206ENST00000498645 KIF28PB7ZC32 967 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 BAIAP3O94812 1187 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 ZNF200P98182 395 aaPredicted RBP12.76□□□□□ -0.37
LSAMP-206ENST00000498645 SP2Q02086 613 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 SKIV2LQ15477 1246 aaKnown RBP12.76□□□□□ -0.37
LSAMP-206ENST00000498645 CASC1Q6TDU7 716 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 ZNF654Q8IZM8 581 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 SAMD3Q8N6K7 520 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 CTCFLQ8NI51 663 aaPredicted RBP12.76□□□□□ -0.37
LSAMP-206ENST00000498645 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 PHOSPHO2Q8TCD6 241 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 IGDCC4Q8TDY8 1250 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 ARNTL2Q8WYA1 636 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 MAP4K1Q92918 833 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
LSAMP-206ENST00000498645 ZBED2Q9BTP6 218 aa12.76□□□□□ -0.37
LSAMP-206ENST00000498645 COL4A4P53420 1690 aaPredicted RBP12.76□□□□□ -0.37
LSAMP-206ENST00000498645 NOP56O00567 594 aaKnown RBP12.75□□□□□ -0.37
LSAMP-206ENST00000498645 PRC1O43663 620 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 TLL1O43897 1013 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 NBNO60934 754 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 PPFIA4O75335 1185 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 DDAH1O94760 285 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 ARHGEF15O94989 841 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 RXRAP19793 462 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 KIF5BP33176 963 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 WDR5P61964 334 aaKnown RBP12.75□□□□□ -0.37
LSAMP-206ENST00000498645 DEFB103AP81534 67 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 PTK7Q13308 1070 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 GNPTABQ3T906 1256 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 ZNF618Q5T7W0 954 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 RAB11FIP4Q86YS3 637 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 IL27Q8NEV9 243 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 CUL5Q93034 780 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 WNT8BQ93098 351 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 BCAS3Q9H6U6 928 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 LY9Q9HBG7 655 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 RTEL1Q9NZ71 1219 aa12.75□□□□□ -0.37
LSAMP-206ENST00000498645 SEC63Q9UGP8 760 aaKnown RBP12.75□□□□□ -0.37
LSAMP-206ENST00000498645 EPOPA6NHQ4 379 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 CCDC69A6NI79 296 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 HAS3O00219 553 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
LSAMP-206ENST00000498645 PLEKHA8P1O95397 391 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 THPOP40225 353 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 MRPS9P82933 396 aaKnown RBP12.74□□□□□ -0.37
LSAMP-206ENST00000498645 SP4Q02446 784 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 TAP1Q03518 808 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 GPNMBQ14956 572 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 TCTN1Q2MV58 587 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 KRT40Q6A162 431 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 FAM117BQ6P1L5 589 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 CNKSR3Q6P9H4 555 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 USP17L6PQ6QN14 398 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 SPRED2Q7Z698 418 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 CMTR1Q8N1G2 835 aaKnown RBP12.74□□□□□ -0.37
LSAMP-206ENST00000498645 ATXN2LQ8WWM7 1075 aaKnown RBP12.74□□□□□ -0.37
LSAMP-206ENST00000498645 ASB2Q96Q27 587 aa12.74□□□□□ -0.37
LSAMP-206ENST00000498645 TSPYL2Q9H2G4 693 aaPredicted RBP12.74□□□□□ -0.37
LSAMP-206ENST00000498645 TCF20Q9UGU0 1960 aaKnown RBP12.74□□□□□ -0.37
LSAMP-206ENST00000498645 MICAL3Q7RTP6 2002 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 KAT6AQ92794 2004 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 C17orf102A2RUQ5 167 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 LCHNA4D1U4 455 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 H3BRB1 525 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 PARNO95453 639 aaKnown RBP12.73□□□□□ -0.37
LSAMP-206ENST00000498645 LGALS2P05162 132 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 TGFB3P10600 412 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 HOXD8P13378 290 aaPredicted RBP12.73□□□□□ -0.37
LSAMP-206ENST00000498645 MCM5P33992 734 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 MRPS5P82675 430 aaKnown RBP12.73□□□□□ -0.37
LSAMP-206ENST00000498645 RBL2Q08999 1139 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 HIC1Q14526 733 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 TRIM71Q2Q1W2 868 aaKnown RBP12.73□□□□□ -0.37
LSAMP-206ENST00000498645 CYFIP1Q7L576 1253 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 ATP6V0A1Q93050 837 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms