RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 KIAA1217Q5T5P2 1943 aa13.97□□□□□ -0.17
CNOT4-211ENST00000498534 ABHD14A-ACY1A0A1B0GW23 586 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 PALM3A6NDB9 673 aaPredicted RBP13.96□□□□□ -0.17
CNOT4-211ENST00000498534 GCOM1H8Y6P7 765 aaPredicted RBP13.96□□□□□ -0.17
CNOT4-211ENST00000498534 EFCAB14O75071 495 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 POLR2MP0CAP2 368 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 CKBP12277 381 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 GHRHRQ02643 423 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 RBL2Q08999 1139 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 PTK7Q13308 1070 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 IKBKEQ14164 716 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 SEC23AQ15436 765 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 CELF3Q5SZQ8 465 aaKnown RBP13.96□□□□□ -0.17
CNOT4-211ENST00000498534 MYSM1Q5VVJ2 828 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 MTMR8Q96EF0 704 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 SPATA33Q96N06 139 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 PDCD2LQ9BRP1 358 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 MAD2L2Q9UI95 211 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 COG5Q9UP83 839 aa13.96□□□□□ -0.17
CNOT4-211ENST00000498534 MUC3AQ02505 3323 aa13.96□□□□□ -0.18
CNOT4-211ENST00000498534 PRRC2BQ5JSZ5 2229 aaKnown RBP13.95□□□□□ -0.18
CNOT4-211ENST00000498534 LAMA4Q16363 1823 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 HAS3O00219 553 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 IFIT3O14879 490 aaKnown RBP13.95□□□□□ -0.18
CNOT4-211ENST00000498534 F2P00734 622 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 CXCL10P02778 98 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 ZNF286BP0CG31 522 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 BMP1P13497 986 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 CCND2P30279 289 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 HOXA13P31271 388 aaPredicted RBP13.95□□□□□ -0.18
CNOT4-211ENST00000498534 WDR5P61964 334 aaKnown RBP13.95□□□□□ -0.18
CNOT4-211ENST00000498534 SART3Q15020 963 aaKnown RBP13.95□□□□□ -0.18
CNOT4-211ENST00000498534 CYB5R4Q7L1T6 521 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 HOMER1Q86YM7 354 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 TET1Q8NFU7 2136 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 CTAGE1Q96RT6 745 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 RAD9AQ99638 391 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 MLXIPQ9HAP2 919 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 MYH7BA7E2Y1 1941 aa13.95□□□□□ -0.18
CNOT4-211ENST00000498534 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
CNOT4-211ENST00000498534 OPLAHO14841 1288 aa13.94□□□□□ -0.18
CNOT4-211ENST00000498534 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
CNOT4-211ENST00000498534 GGPS1O95749 300 aa13.94□□□□□ -0.18
CNOT4-211ENST00000498534 TFF2Q03403 129 aa13.94□□□□□ -0.18
CNOT4-211ENST00000498534 GPNMBQ14956 572 aa13.94□□□□□ -0.18
CNOT4-211ENST00000498534 PGM5Q15124 567 aa13.94□□□□□ -0.18
CNOT4-211ENST00000498534 RALYLQ86SE5 291 aaKnown RBP13.94□□□□□ -0.18
CNOT4-211ENST00000498534 FCHSD1Q86WN1 690 aa13.94□□□□□ -0.18
CNOT4-211ENST00000498534 DHX38Q92620 1227 aaKnown RBP13.94□□□□□ -0.18
CNOT4-211ENST00000498534 PIGSQ96S52 555 aa13.94□□□□□ -0.18
CNOT4-211ENST00000498534 RIOX1Q9H6W3 641 aa13.94□□□□□ -0.18
CNOT4-211ENST00000498534 EMSYQ7Z589 1322 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 EPOPA6NHQ4 379 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 SORBS3O60504 671 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 NBNO60934 754 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 RGS20O76081 388 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 GJB5O95377 273 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 HOXD8P13378 290 aaPredicted RBP13.93□□□□□ -0.18
CNOT4-211ENST00000498534 COL9A1P20849 921 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 GRB10Q13322 594 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 GRM4Q14833 912 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 WTAPQ15007 396 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 HSDL1Q3SXM5 330 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 GNPTABQ3T906 1256 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 ZNF618Q5T7W0 954 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 CATIPQ7Z7H3 387 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 HLA-CQ95604 372 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 LMCD1Q9NZU5 365 aa13.93□□□□□ -0.18
CNOT4-211ENST00000498534 H3BRB1 525 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 LGR5O75473 907 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 STAM2O75886 525 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 THPOP40225 353 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 DEFB103AP81534 67 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 ZNF200P98182 395 aaPredicted RBP13.92□□□□□ -0.18
CNOT4-211ENST00000498534 SP2Q02086 613 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 TTC22Q5TAA0 569 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 KRT40Q6A162 431 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 TMCO2Q7Z6W1 182 aaPredicted RBP13.92□□□□□ -0.18
CNOT4-211ENST00000498534 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
CNOT4-211ENST00000498534 NCOA7Q8NI08 942 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 USP26Q9BXU7 913 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 TUT1Q9H6E5 874 aaKnown RBP13.92□□□□□ -0.18
CNOT4-211ENST00000498534 TANC1Q9C0D5 1861 aa13.92□□□□□ -0.18
CNOT4-211ENST00000498534 TCF20Q9UGU0 1960 aaKnown RBP13.92□□□□□ -0.18
CNOT4-211ENST00000498534 REV3LO60673 3130 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 C17orf102A2RUQ5 167 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 LCHNA4D1U4 455 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 RSPH10B2B2RC85 870 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 NOP56O00567 594 aaKnown RBP13.91□□□□□ -0.18
CNOT4-211ENST00000498534 ARHGEF15O94989 841 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 AMHP03971 560 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 CYP21A2P08686 494 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 RSPH10BP0C881 870 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 GNAT1P11488 350 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 UBA1P22314 1058 aaKnown RBP13.91□□□□□ -0.18
CNOT4-211ENST00000498534 KCNQ1P51787 676 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 NEDD9Q14511 834 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 TRIM71Q2Q1W2 868 aaKnown RBP13.91□□□□□ -0.18
CNOT4-211ENST00000498534 FAM117BQ6P1L5 589 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 SERINC5Q86VE9 423 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms