RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 HPSEQ9Y251 543 aa12.72□□□□□ -0.37
PBX1-211ENST00000498497 USP20Q9Y2K6 914 aa12.72□□□□□ -0.37
PBX1-211ENST00000498497 GDAQ9Y2T3 454 aa12.72□□□□□ -0.37
PBX1-211ENST00000498497 TCP11X1B4DZS4 312 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 DAPK3O43293 454 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 XBP1P17861 261 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 MLH1P40692 756 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 COPS2P61201 443 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 TDRD12Q587J7 1177 aaKnown RBP12.71□□□□□ -0.37
PBX1-211ENST00000498497 KANK3Q6NY19 840 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 RIBC1Q8N443 379 aaPredicted RBP12.71□□□□□ -0.37
PBX1-211ENST00000498497 KCNK9Q9NPC2 374 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 IQGAP2Q13576 1575 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 CFAP73A6NFT4 308 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 TSPY2A6NKD2 308 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 OPHN1O60890 802 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 TMCC1O94876 653 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 TSPY3P0CV98 308 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 TSPY8P0CW00 308 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 ATP6V1C1P21283 382 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 COPB2P35606 906 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 TSPY1Q01534 308 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 NR5A1Q13285 461 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 OR52E8Q6IFG1 317 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 DHRS1Q96LJ7 313 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 CELF4Q9BZC1 486 aaKnown RBP12.71□□□□□ -0.37
PBX1-211ENST00000498497 NMRK1Q9NWW6 199 aa12.71□□□□□ -0.37
PBX1-211ENST00000498497 PALM3A6NDB9 673 aaPredicted RBP12.71□□□□□ -0.38
PBX1-211ENST00000498497 OR6B1O95007 311 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 EPHB2P29323 1055 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 ERVK-9P63128 1117 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 BTKQ06187 659 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 DMPKQ09013 629 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 NCCRP1Q6ZVX7 275 aaPredicted RBP12.71□□□□□ -0.38
PBX1-211ENST00000498497 TEX9Q8N6V9 391 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 MPP4Q96JB8 637 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 RMDN2Q96LZ7 410 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 CYTH2Q99418 400 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 SLX1AQ9BQ83 275 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 TUBGCP4Q9UGJ1 667 aa12.71□□□□□ -0.38
PBX1-211ENST00000498497 COL3A1P02461 1466 aaPredicted RBP12.7□□□□□ -0.38
PBX1-211ENST00000498497 LIN7AO14910 233 aaPredicted RBP12.7□□□□□ -0.38
PBX1-211ENST00000498497 ZNF263O14978 683 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 NVLO15381 856 aaKnown RBP12.7□□□□□ -0.38
PBX1-211ENST00000498497 UBAP2Q5T6F2 1119 aaKnown RBP12.7□□□□□ -0.38
PBX1-211ENST00000498497 FITM2Q8N6M3 262 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 CTAGE1Q96RT6 745 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 CSRNP2Q9H175 543 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 VCX3BQ9H321 246 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 AZI2Q9H6S1 392 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 VCX3AQ9NNX9 186 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 SNRKQ9NRH2 765 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 SERPINA10Q9UK55 444 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 PCDHB6Q9Y5E3 794 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 UNCXA6NJT0 531 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 HIP1O00291 1037 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 STK10O94804 968 aaKnown RBP12.7□□□□□ -0.38
PBX1-211ENST00000498497 GHRP10912 638 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 USP11P51784 963 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 RIPK1Q13546 671 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 ATP11CQ8NB49 1132 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 USP33Q8TEY7 942 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 SLC26A6Q9BXS9 759 aa12.7□□□□□ -0.38
PBX1-211ENST00000498497 DMAP1Q9NPF5 467 aaPredicted RBP12.7□□□□□ -0.38
PBX1-211ENST00000498497 DBR1Q9UK59 544 aaKnown RBP12.7□□□□□ -0.38
PBX1-211ENST00000498497 PRC1O43663 620 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 E2F6O75461 281 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 CYP1A1P04798 512 aaPredicted RBP12.69□□□□□ -0.38
PBX1-211ENST00000498497 SCG2P13521 617 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 RPL13P26373 211 aaKnown RBP12.69□□□□□ -0.38
PBX1-211ENST00000498497 COG7P83436 770 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 GFPT1Q06210 699 aaPredicted RBP12.69□□□□□ -0.38
PBX1-211ENST00000498497 TNIP1Q15025 636 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 LLGL1Q15334 1064 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 CFAP221Q4G0U5 840 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 PABPC1LQ4VXU2 614 aaKnown RBP12.69□□□□□ -0.38
PBX1-211ENST00000498497 VWA3BQ502W6 1294 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 UTS2BQ765I0 119 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 EXOC3L1Q86VI1 746 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 WDR60Q8WVS4 1066 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 MKNK1Q9BUB5 465 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 CEP72Q9P209 647 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 BARX2Q9UMQ3 279 aaPredicted RBP12.69□□□□□ -0.38
PBX1-211ENST00000498497 INO80Q9ULG1 1556 aaPredicted RBP12.69□□□□□ -0.38
PBX1-211ENST00000498497 A0A087X0B3 334 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 DNAJC6O75061 913 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 PBX1P40424 430 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 GRAMD4Q6IC98 578 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 UBE3BQ7Z3V4 1068 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 CCDC25Q86WR0 208 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 WDR75Q8IWA0 830 aaKnown RBP12.69□□□□□ -0.38
PBX1-211ENST00000498497 STAG2Q8N3U4 1231 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 HAUS1Q96CS2 278 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 IFT74Q96LB3 600 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 CDK19Q9BWU1 502 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 TAOK3Q9H2K8 898 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 ARPP21Q9UBL0 812 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms