RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 MYSM1Q5VVJ2 828 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 SH3RF1Q7Z6J0 888 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 EMID1Q96A84 441 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-213ENST00000498495 INPP4AQ96PE3 977 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-213ENST00000498495 GDF15Q99988 308 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 ZMYND12Q9H0C1 365 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 PDLIM7Q9NR12 457 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 KIAA1217Q5T5P2 1943 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 ESYT2A0FGR8 921 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 TRIM43BA6NCK2 446 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 SORBS3O60504 671 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 PFKFB2O60825 505 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 CDKL5O76039 1030 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 DEXIO95424 95 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 RAG1P15918 1043 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 BMP8BP34820 402 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 SCRN1Q12765 414 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 AP3B2Q13367 1082 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 NEDD9Q14511 834 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 DGKDQ16760 1214 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 JAKMIP3Q5VZ66 844 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 SLC43A3Q8NBI5 491 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 CCDC148Q8NFR7 591 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 TRIM43Q96BQ3 446 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-213ENST00000498495 SPATA33Q96N06 139 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 ANO3Q9BYT9 981 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 TMEM260Q9NX78 707 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 GRIN2DO15399 1336 aa14.65□□□□□ -0.06
HSPG2-213ENST00000498495 MAFGO15525 162 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 PPFIA4O75335 1185 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 UBA1P22314 1058 aaKnown RBP14.64□□□□□ -0.07
HSPG2-213ENST00000498495 CLK2P49760 499 aaKnown RBP14.64□□□□□ -0.07
HSPG2-213ENST00000498495 NLRP5P59047 1200 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 CHMP4BP1P59074 171 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 HABP4Q5JVS0 413 aaKnown RBP14.64□□□□□ -0.07
HSPG2-213ENST00000498495 MCTP2Q6DN12 878 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 FAM126BQ8IXS8 530 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 PPTC7Q8NI37 304 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 BICD2Q8TD16 824 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 GPRASP2Q96D09 838 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 CDHR1Q96JP9 859 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 PGBD1Q96JS3 809 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 C22orf23Q9BZE7 217 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 UBE2OQ9C0C9 1292 aaKnown RBP14.64□□□□□ -0.07
HSPG2-213ENST00000498495 SH3GLB2Q9NR46 395 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 VPS54Q9P1Q0 977 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 PCDH10Q9P2E7 1040 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 UBIAD1Q9Y5Z9 338 aa14.64□□□□□ -0.07
HSPG2-213ENST00000498495 NOP56O00567 594 aaKnown RBP14.63□□□□□ -0.07
HSPG2-213ENST00000498495 KIAA0355O15063 1070 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 ITGB5P18084 799 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 ZNF76P36508 570 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 NBPF20Q3BBV1 942 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 HSDL1Q3SXM5 330 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 FAM47CQ5HY64 1035 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 CYFIP1Q7L576 1253 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 GIMAP8Q8ND71 665 aaPredicted RBP14.63□□□□□ -0.07
HSPG2-213ENST00000498495 BADQ92934 168 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 SENP7Q9BQF6 1050 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 MXRA8Q9BRK3 442 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 PRO3102Q9H379 93 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
HSPG2-213ENST00000498495 JADE2Q9NQC1 790 aa14.63□□□□□ -0.07
HSPG2-213ENST00000498495 CD4P01730 458 aa14.62□□□□□ -0.07
HSPG2-213ENST00000498495 SUPT20HL2P0C7V6 817 aa14.62□□□□□ -0.07
HSPG2-213ENST00000498495 PTPN11Q06124 597 aaPredicted RBP14.62□□□□□ -0.07
HSPG2-213ENST00000498495 SEMA3FQ13275 785 aa14.62□□□□□ -0.07
HSPG2-213ENST00000498495 MTMR1Q13613 665 aa14.62□□□□□ -0.07
HSPG2-213ENST00000498495 ME3Q16798 604 aa14.62□□□□□ -0.07
HSPG2-213ENST00000498495 NFRKBQ6P4R8 1299 aa14.62□□□□□ -0.07
HSPG2-213ENST00000498495 METTL7BQ6UX53 244 aa14.62□□□□□ -0.07
HSPG2-213ENST00000498495 REXO1Q8N1G1 1221 aaKnown RBP14.62□□□□□ -0.07
HSPG2-213ENST00000498495 KATNAL1Q9BW62 490 aa14.62□□□□□ -0.07
HSPG2-213ENST00000498495 TRPV6Q9H1D0 765 aa14.62□□□□□ -0.07
HSPG2-213ENST00000498495 BCAS3Q9H6U6 928 aa14.62□□□□□ -0.07
HSPG2-213ENST00000498495 A0A1W2PPC1 479 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 B4GALT4O60513 344 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 ATP9AO75110 1047 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 TIMP1P01033 207 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 ITGB8P26012 769 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 SREBF1P36956 1147 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 CEP55Q53EZ4 464 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 NECAB1Q8N987 351 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 ALG1Q9BT22 464 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 PKD2L1Q9P0L9 805 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 TBX21Q9UL17 535 aa14.61□□□□□ -0.07
HSPG2-213ENST00000498495 MYH7BA7E2Y1 1941 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 ADAMTS3O15072 1205 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 XBP1P17861 261 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 RBM25P49756 843 aaKnown RBP14.6□□□□□ -0.07
HSPG2-213ENST00000498495 PSEN2P49810 448 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 ARHGAP4P98171 946 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 SP4Q02446 784 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 CYP2W1Q8TAV3 490 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 PPP1R13LQ8WUF5 828 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 KAT2BQ92831 832 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 PPP1R12CQ9BZL4 782 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 KCNH7Q9NS40 1196 aa14.6□□□□□ -0.07
HSPG2-213ENST00000498495 TRMT13Q9NUP7 481 aaKnown RBP14.6□□□□□ -0.07
HSPG2-213ENST00000498495 PCDHA4Q9UN74 947 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms