RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 TRERF1Q96PN7 1200 aa9.41□□□□□ -0.9
PUDP-205ENST00000498474 ZSCAN10Q96SZ4 725 aaPredicted RBP9.41□□□□□ -0.9
PUDP-205ENST00000498474 GDF15Q99988 308 aa9.41□□□□□ -0.9
PUDP-205ENST00000498474 TINF2Q9BSI4 451 aa9.41□□□□□ -0.9
PUDP-205ENST00000498474 KRTAP4-6Q9BYQ5 205 aa9.41□□□□□ -0.9
PUDP-205ENST00000498474 TOMM22Q9NS69 142 aa9.41□□□□□ -0.9
PUDP-205ENST00000498474 STX8Q9UNK0 236 aa9.41□□□□□ -0.9
PUDP-205ENST00000498474 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.41□□□□□ -0.9
PUDP-205ENST00000498474 SUPT16HQ9Y5B9 1047 aaKnown RBP9.41□□□□□ -0.9
PUDP-205ENST00000498474 PLIN4Q96Q06 1357 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 TSPY2A6NKD2 308 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 SEPT4O43236 478 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 ZBED4O75132 1171 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 SLC3A2P08195 630 aaKnown RBP9.4□□□□□ -0.9
PUDP-205ENST00000498474 ZNF865P0CJ78 1059 aaPredicted RBP9.4□□□□□ -0.9
PUDP-205ENST00000498474 HSPD1P10809 573 aaKnown RBP9.4□□□□□ -0.9
PUDP-205ENST00000498474 CAPN2P17655 700 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 MX2P20592 715 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 ADCYAP1R1P41586 468 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 RTP1P59025 263 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 VAC14Q08AM6 782 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 IKQ13123 557 aaPredicted RBP9.4□□□□□ -0.9
PUDP-205ENST00000498474 KCTD2Q14681 263 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 LRRC41Q15345 812 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 MCMDC2Q4G0Z9 681 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 CCDC174Q6PII3 467 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 CHD1LQ86WJ1 897 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 SMC5Q8IY18 1101 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 ABRAQ8N0Z2 381 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 RWDD1Q9H446 243 aaPredicted RBP9.4□□□□□ -0.9
PUDP-205ENST00000498474 SLC38A10Q9HBR0 1119 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 ZNF287Q9HBT7 754 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 HELLSQ9NRZ9 838 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 SLC5A4Q9NY91 659 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 FEM1BQ9UK73 627 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 ATP11BQ9Y2G3 1177 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 CTDP1Q9Y5B0 961 aaPredicted RBP9.4□□□□□ -0.9
PUDP-205ENST00000498474 LCTP09848 1927 aa9.4□□□□□ -0.9
PUDP-205ENST00000498474 DNM1LO00429 736 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 SNAI1O95863 264 aaPredicted RBP9.39□□□□□ -0.91
PUDP-205ENST00000498474 PTGS1P23219 599 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 SLC16A2P36021 539 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 CNTN2Q02246 1040 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 C4orf17Q53FE4 359 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 TTBK2Q6IQ55 1244 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 GMCL1P1Q8NEA9 526 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 DDX11Q96FC9 970 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 FGD4Q96M96 766 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 TEX13BQ9BXU2 312 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 ENAMQ9NRM1 1142 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 DOLKQ9UPQ8 538 aa9.39□□□□□ -0.91
PUDP-205ENST00000498474 DNMT3AQ9Y6K1 912 aaPredicted RBP9.39□□□□□ -0.91
PUDP-205ENST00000498474 LTBP2Q14767 1821 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 ZNF536O15090 1300 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 FRMPD2Q68DX3 1309 aaPredicted RBP9.38□□□□□ -0.91
PUDP-205ENST00000498474 DNAJC25-GNG10A0A024R161 153 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 MYADML2A6NDP7 307 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 KBTBD13C9JR72 458 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 ADCY6O43306 1168 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 MSCO60682 206 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 ALAS1P13196 640 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 SDSP20132 328 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 SLC1A4P43007 532 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 NUCB1Q02818 461 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 ALX1Q15699 326 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 CCDC96Q2M329 555 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 TRIM60Q495X7 471 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 MUM1L1Q5H9M0 696 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 TMEM214Q6NUQ4 689 aaKnown RBP9.38□□□□□ -0.91
PUDP-205ENST00000498474 KANK3Q6NY19 840 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 CWC27Q6UX04 472 aaKnown RBP9.38□□□□□ -0.91
PUDP-205ENST00000498474 SLC39A5Q6ZMH5 540 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 Q7L0L9 218 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 TBC1D10CQ8IV04 446 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 ANKRD35Q8N283 1001 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 ARRDC4Q8NCT1 418 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 STAG1Q8WVM7 1258 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 ZKSCAN3Q9BRR0 538 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 UBE2OQ9C0C9 1292 aaKnown RBP9.38□□□□□ -0.91
PUDP-205ENST00000498474 IL25Q9H293 177 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 RUBCNLQ9H714 662 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 ETNK1Q9HBU6 452 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 GDPD2Q9HCC8 539 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 XPNPEP3Q9NQH7 507 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
PUDP-205ENST00000498474 ANAPC4Q9UJX5 808 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 ZHX1Q9UKY1 873 aaPredicted RBP9.38□□□□□ -0.91
PUDP-205ENST00000498474 UNC80Q8N2C7 3258 aa9.38□□□□□ -0.91
PUDP-205ENST00000498474 CCDC171Q6TFL3 1326 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 PRUNE2Q8WUY3 3088 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.37□□□□□ -0.91
PUDP-205ENST00000498474 ATP2A1O14983 1001 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 RARBP10826 455 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 BMP8BP34820 402 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 STAT2P52630 851 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 UBAP2LQ14157 1087 aaKnown RBP9.37□□□□□ -0.91
PUDP-205ENST00000498474 TMEM63BQ5T3F8 832 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 RCSD1Q6JBY9 416 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms