RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 TIMM13Q9Y5L4 95 aaPredicted RBP4.86□□□□□ -1.63
CALD1-224ENST00000498254 TRBV23OR9-2A0A075B6M9 112 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 PRPF3O43395 683 aaKnown RBP4.85□□□□□ -1.63
CALD1-224ENST00000498254 FBXO21O94952 628 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 TBC1D8O95759 1140 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 COL6A2P12110 1019 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 CD97P48960 835 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 MECP2P51608 486 aaKnown RBP4.85□□□□□ -1.63
CALD1-224ENST00000498254 JAM2P57087 298 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 RPL11P62913 178 aaKnown RBP4.85□□□□□ -1.63
CALD1-224ENST00000498254 NFIAQ12857 509 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 LSAMPQ13449 338 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 TESK1Q15569 626 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 CRY1Q16526 586 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 DDB1Q16531 1140 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 GAB4Q2WGN9 574 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 RNF43Q68DV7 783 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 FSTL4Q6MZW2 842 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 CEP68Q76N32 757 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 NLRP10Q86W26 655 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 OSTM1Q86WC4 334 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 CLRN3Q8NCR9 226 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 AHCYL2Q96HN2 611 aaKnown RBP4.85□□□□□ -1.63
CALD1-224ENST00000498254 ORAI3Q9BRQ5 295 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 MS4A5Q9H3V2 200 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 ATG3Q9NT62 314 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 OXSMQ9NWU1 459 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 ERVK13-1Q9NX77 482 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 MARCH2Q9P0N8 246 aa4.85□□□□□ -1.63
CALD1-224ENST00000498254 LUC7L2Q9Y383 392 aaKnown RBP4.85□□□□□ -1.63
CALD1-224ENST00000498254 GSTA4O15217 222 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 NPHS1O60500 1241 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 CT47B1P0C2W7 299 aaPredicted RBP4.84□□□□□ -1.63
CALD1-224ENST00000498254 GNAT1P11488 350 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 ZSCAN20P17040 1043 aaPredicted RBP4.84□□□□□ -1.63
CALD1-224ENST00000498254 SLC9A1P19634 815 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 CCND1P24385 295 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 GNALP38405 381 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 GRIK1P39086 918 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 OCRLQ01968 901 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 TEKQ02763 1124 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 MLC1Q15049 377 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 RNF111Q6ZNA4 994 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 C16orf59Q7L2K0 433 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 CMIPQ8IY22 773 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 DPF3Q92784 378 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 SLC5A5Q92911 643 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 TMEM169Q96HH4 297 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 PSMD1Q99460 953 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 CDH19Q9H159 772 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 LUC7LQ9NQ29 371 aaKnown RBP4.84□□□□□ -1.63
CALD1-224ENST00000498254 SEMA3GQ9NS98 782 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 C14orf119Q9NWQ9 140 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 RWDD3Q9Y3V2 267 aa4.84□□□□□ -1.63
CALD1-224ENST00000498254 WASHC2AQ641Q2 1341 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 LCHNA4D1U4 455 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 WTIPA6NIX2 430 aaPredicted RBP4.83□□□□□ -1.64
CALD1-224ENST00000498254 H7C1D1 291 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 CYP26A1O43174 497 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 ULK1O75385 1050 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 ESR1P03372 595 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 FUCA1P04066 466 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 CLCN7P51798 805 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 SCAND1P57086 179 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 ERVK-21P61565 698 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 IRF9Q00978 393 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 TCIRG1Q13488 830 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 PCBP2Q15366 365 aaKnown RBP eCLIP4.83□□□□□ -1.64
CALD1-224ENST00000498254 BROXQ5VW32 411 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 CPZQ66K79 652 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 CREB3L3Q68CJ9 461 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 PGM2L1Q6PCE3 622 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 SLC4A10Q6U841 1118 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 CYP2R1Q6VVX0 501 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 ARHGAP36Q6ZRI8 547 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 PTRH1Q86Y79 214 aaKnown RBP4.83□□□□□ -1.64
CALD1-224ENST00000498254 TPH2Q8IWU9 490 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 CCAR1Q8IX12 1150 aaKnown RBP4.83□□□□□ -1.64
CALD1-224ENST00000498254 CBARPQ8N350 705 aaPredicted RBP4.83□□□□□ -1.64
CALD1-224ENST00000498254 TMEM52Q8NDY8 209 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 JPH3Q8WXH2 748 aaPredicted RBP4.83□□□□□ -1.64
CALD1-224ENST00000498254 TRMT2BQ96GJ1 504 aaKnown RBP4.83□□□□□ -1.64
CALD1-224ENST00000498254 DBNDD2Q9BQY9 259 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 METTL22Q9BUU2 404 aaPredicted RBP4.83□□□□□ -1.64
CALD1-224ENST00000498254 RHOBTB2Q9BYZ6 727 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 SMURF1Q9HCE7 757 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 TOMM22Q9NS69 142 aa4.83□□□□□ -1.64
CALD1-224ENST00000498254 PITPNM2Q9BZ72 1349 aa4.82□□□□□ -1.64
CALD1-224ENST00000498254 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.82□□□□□ -1.64
CALD1-224ENST00000498254 SLC12A8A0AV02 714 aa4.82□□□□□ -1.64
CALD1-224ENST00000498254 ZNF561-AS1K7EIQ3 104 aa4.82□□□□□ -1.64
CALD1-224ENST00000498254 SCDO00767 359 aa4.82□□□□□ -1.64
CALD1-224ENST00000498254 NKRFO15226 690 aaKnown RBP eCLIP4.82□□□□□ -1.64
CALD1-224ENST00000498254 TPD52L2O43399 206 aaKnown RBP4.82□□□□□ -1.64
CALD1-224ENST00000498254 TGM5O43548 720 aa4.82□□□□□ -1.64
CALD1-224ENST00000498254 XPOTO43592 962 aaKnown RBP4.82□□□□□ -1.64
CALD1-224ENST00000498254 SNUPNO95149 360 aaKnown RBP4.82□□□□□ -1.64
CALD1-224ENST00000498254 AMY2AP04746 511 aa4.82□□□□□ -1.64
CALD1-224ENST00000498254 TAL1P17542 331 aaPredicted RBP4.82□□□□□ -1.64
CALD1-224ENST00000498254 AMY2BP19961 511 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms