RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 SGPP1Q9BX95 441 aa7.05□□□□□ -1.28
SSR3-209ENST00000498205 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
SSR3-209ENST00000498205 FBXL7Q9UJT9 491 aa7.05□□□□□ -1.28
SSR3-209ENST00000498205 PLD2O14939 933 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 TADA3O75528 432 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 ASGR2P07307 311 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 GNAT1P11488 350 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 IGFBP6P24592 240 aaPredicted RBP7.04□□□□□ -1.28
SSR3-209ENST00000498205 CACNB2Q08289 660 aaPredicted RBP7.04□□□□□ -1.28
SSR3-209ENST00000498205 FNDC3BQ53EP0 1204 aaKnown RBP7.04□□□□□ -1.28
SSR3-209ENST00000498205 FAM47CQ5HY64 1035 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 IGDCC3Q8IVU1 814 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 SH3TC2Q8TF17 1288 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 DDX11Q96FC9 970 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 TMEM260Q9NX78 707 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 SFMBT1Q9UHJ3 866 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 PALD1Q9ULE6 856 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 PCDHB4Q9Y5E5 795 aa7.04□□□□□ -1.28
SSR3-209ENST00000498205 BLACEA4D250 179 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 EPHB3P54753 998 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 GUCY1A3Q02108 690 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 OTOP3Q7RTS5 596 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 B3GNT8Q7Z7M8 397 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 FAM126BQ8IXS8 530 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 GSTCDQ8NEC7 633 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 MAGEB10Q96LZ2 347 aaPredicted RBP7.03□□□□□ -1.28
SSR3-209ENST00000498205 NCOA5Q9HCD5 579 aaKnown RBP7.03□□□□□ -1.28
SSR3-209ENST00000498205 TRAF6Q9Y4K3 522 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 KCTD3Q9Y597 815 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 HCFC2Q9Y5Z7 792 aa7.03□□□□□ -1.28
SSR3-209ENST00000498205 ASXL2Q76L83 1435 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 ARVCFO00192 962 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 NPTXRO95502 500 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 PMLP29590 882 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 CNKSR3Q6P9H4 555 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 HOMER1Q86YM7 354 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 SIAH1Q8IUQ4 282 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 TTLL11Q8NHH1 800 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 FBXW5Q969U6 566 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 YIPF4Q9BSR8 244 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 PDGFDQ9GZP0 370 aaPredicted RBP7.02□□□□□ -1.29
SSR3-209ENST00000498205 RXFP1Q9HBX9 757 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 MYOTQ9UBF9 498 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 NDOR1Q9UHB4 597 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 SIT1Q9Y3P8 196 aa7.02□□□□□ -1.29
SSR3-209ENST00000498205 B4E1Z4 1266 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 NUAK1O60285 661 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 CYP2C8P10632 490 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 ST5P78524 1137 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 FOXO4P98177 505 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 HABP4Q5JVS0 413 aaKnown RBP7.01□□□□□ -1.29
SSR3-209ENST00000498205 TCERG1LQ5VWI1 586 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 C16orf59Q7L2K0 433 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 FAM129CQ86XR2 697 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 NLGN4XQ8N0W4 816 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 UHMK1Q8TAS1 419 aaKnown RBP7.01□□□□□ -1.29
SSR3-209ENST00000498205 JAM3Q9BX67 310 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 PIF1Q9H611 641 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 HSPBP1Q9NZL4 362 aa7.01□□□□□ -1.29
SSR3-209ENST00000498205 RB1CC1Q8TDY2 1594 aa7□□□□□ -1.29
SSR3-209ENST00000498205 NKX3-2P78367 333 aa7□□□□□ -1.29
SSR3-209ENST00000498205 TCEA2Q15560 299 aa7□□□□□ -1.29
SSR3-209ENST00000498205 ZC3H7AQ8IWR0 971 aaKnown RBP7□□□□□ -1.29
SSR3-209ENST00000498205 LRRC56Q8IYG6 542 aaPredicted RBP7□□□□□ -1.29
SSR3-209ENST00000498205 TMEFF1Q8IYR6 380 aa7□□□□□ -1.29
SSR3-209ENST00000498205 APPBP2Q92624 585 aa7□□□□□ -1.29
SSR3-209ENST00000498205 TOE1Q96GM8 510 aaKnown RBP7□□□□□ -1.29
SSR3-209ENST00000498205 IPPKQ9H8X2 491 aa7□□□□□ -1.29
SSR3-209ENST00000498205 SLC52A2Q9HAB3 445 aa7□□□□□ -1.29
SSR3-209ENST00000498205 DTLQ9NZJ0 730 aa7□□□□□ -1.29
SSR3-209ENST00000498205 ASH2LQ9UBL3 628 aa7□□□□□ -1.29
SSR3-209ENST00000498205 RSF1Q96T23 1441 aaPredicted RBP7□□□□□ -1.29
SSR3-209ENST00000498205 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.99□□□□□ -1.29
SSR3-209ENST00000498205 TCRBV5S2A0A599 114 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 RFPL3O75679 317 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 CRTAMO95727 393 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 PI3P19957 117 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 NCKAP1LP55160 1127 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 SQSTM1Q13501 440 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 GPR19Q15760 415 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 CRY1Q16526 586 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 EP400NLQ6ZTU2 488 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 CILP2Q8IUL8 1156 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 PIP4K2CQ8TBX8 421 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 KCNJ15Q99712 375 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 KRTAP4-12Q9BQ66 201 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 PPARGC1AQ9UBK2 798 aaKnown RBP6.99□□□□□ -1.29
SSR3-209ENST00000498205 DSEQ9UL01 958 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 PCDHA8Q9Y5H6 950 aa6.99□□□□□ -1.29
SSR3-209ENST00000498205 ATF2P15336 505 aa6.98□□□□□ -1.29
SSR3-209ENST00000498205 CFPP27918 469 aa6.98□□□□□ -1.29
SSR3-209ENST00000498205 EPHA5P54756 1037 aa6.98□□□□□ -1.29
SSR3-209ENST00000498205 SSPNQ14714 243 aa6.98□□□□□ -1.29
SSR3-209ENST00000498205 TAF7LQ5H9L4 462 aa6.98□□□□□ -1.29
SSR3-209ENST00000498205 PCDH19Q8TAB3 1148 aa6.98□□□□□ -1.29
SSR3-209ENST00000498205 DACT3Q96B18 629 aaPredicted RBP6.98□□□□□ -1.29
SSR3-209ENST00000498205 RNPC3Q96LT9 517 aaKnown RBP6.98□□□□□ -1.29
SSR3-209ENST00000498205 WRNIP1Q96S55 665 aa6.98□□□□□ -1.29
SSR3-209ENST00000498205 PCDHA9Q9Y5H5 950 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms