RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 PRRT2Q7Z6L0 340 aaPredicted RBP19.95■□□□□ 0.78
CHRNA4-206ENST00000498043 DRC7Q8IY82 874 aa19.95■□□□□ 0.78
CHRNA4-206ENST00000498043 PURBQ96QR8 312 aaKnown RBP19.95■□□□□ 0.78
CHRNA4-206ENST00000498043 TAAR1Q96RJ0 339 aa19.95■□□□□ 0.78
CHRNA4-206ENST00000498043 C7orf25Q9BPX7 421 aa19.95■□□□□ 0.78
CHRNA4-206ENST00000498043 NT5C3AQ9H0P0 336 aa19.95■□□□□ 0.78
CHRNA4-206ENST00000498043 HOXC10Q9NYD6 342 aa19.95■□□□□ 0.78
CHRNA4-206ENST00000498043 KIAA1024Q9UPX6 916 aa19.95■□□□□ 0.78
CHRNA4-206ENST00000498043 RABGAP1Q9Y3P9 1069 aa19.95■□□□□ 0.78
CHRNA4-206ENST00000498043 POTEFA5A3E0 1075 aa19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 TRAF5O00463 557 aa19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 ARP10275 920 aa19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 ERCC5P28715 1186 aaPredicted RBP19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 STX17P56962 302 aa19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 KCNB1Q14721 858 aa19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 POTEGQ6S5H5 508 aa19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 POTEEQ6S8J3 1075 aa19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 ARMC9Q7Z3E5 817 aa19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 ERMNQ8TAM6 284 aa19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 ENOX1Q8TC92 643 aaKnown RBP19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 MAP3K20Q9NYL2 800 aaKnown RBP19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 FRMPD4Q14CM0 1322 aa19.94■□□□□ 0.78
CHRNA4-206ENST00000498043 CHMP2AO43633 222 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 ITGB5P18084 799 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 BAATQ14032 418 aaPredicted RBP19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 HS1BP3Q53T59 392 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 OPTNQ96CV9 577 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 MRFAP1L1Q96HT8 127 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 MXRA8Q9BRK3 442 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 ZNF577Q9BSK1 485 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 IFNKQ9P0W0 207 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 MAPK8IP1Q9UQF2 711 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 MYMKA6NI61 221 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 E9PMD0 336 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 MEIS1O00470 390 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 ATP2A1O14983 1001 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 PEX10O60683 326 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 DYMQ7RTS9 669 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 SLC5A5Q92911 643 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 EXOC1Q9NV70 894 aa19.93■□□□□ 0.78
CHRNA4-206ENST00000498043 GAS7O60861 476 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 COBLO75128 1261 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 PSMD10O75832 226 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 RHOBTB3O94955 611 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 SSBP05455 408 aaKnown RBP eCLIP19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 CYP4A11Q02928 519 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 PPIL2Q13356 520 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 PGM5Q15124 567 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 PCNX4Q63HM2 1172 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 CATSPER3Q86XQ3 398 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 SAMD3Q8N6K7 520 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 PROCA1Q8NCQ7 364 aaPredicted RBP19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 RMDN3Q96TC7 470 aa19.92■□□□□ 0.78
CHRNA4-206ENST00000498043 EML1O00423 815 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 MRPS9P82933 396 aaKnown RBP19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 PDE4DQ08499 809 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 CT47A1Q5JQC4 288 aaPredicted RBP19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 WDR11Q9BZH6 1224 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 XPO4Q9C0E2 1151 aaKnown RBP19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 ACAD9Q9H845 621 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 PXMP2Q9NR77 195 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 PKD2L1Q9P0L9 805 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 CDC25BP30305 580 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 PRCPP42785 496 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 FANCCQ00597 558 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 ARHGEF16Q5VV41 709 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 OTOP1Q7RTM1 612 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 CCDC47Q96A33 483 aaKnown RBP19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 KCNH4Q9UQ05 1017 aa19.91■□□□□ 0.78
CHRNA4-206ENST00000498043 IPO5O00410 1097 aaKnown RBP19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 CXCL11O14625 94 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 SLC26A4O43511 780 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 SPATA31C1P0DKV0 1188 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 MYCLP12524 364 aaPredicted RBP19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 RPA1P27694 616 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 IRX3P78415 501 aaPredicted RBP19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 PAK1Q13153 545 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 DDX12PQ92771 950 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 PDCD2LQ9BRP1 358 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 SAMSN1Q9NSI8 373 aaKnown RBP19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 LCTP09848 1927 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 GOLGA6L6A8MZA4 724 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 ESPNB1AK53 854 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 SERPINC1P01008 464 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 PPP2R5CQ13362 524 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 TKFCQ3LXA3 575 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 GIMAP8Q8ND71 665 aaPredicted RBP19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 NELFBQ8WX92 580 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 EIF2AK1Q9BQI3 630 aaKnown RBP19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 A1CFQ9NQ94 594 aaKnown RBP19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 KCNH7Q9NS40 1196 aa19.9■□□□□ 0.78
CHRNA4-206ENST00000498043 DDX39AO00148 427 aaKnown RBP19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 PLA2G4BP0C869 781 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 FCER1AP12319 257 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 HOXA7P31268 230 aaPredicted RBP19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 SPATA1Q5VX52 437 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 LBX2Q6XYB7 198 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 HPS3Q969F9 1004 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 ZNF830Q96NB3 372 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms