RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 MTMR1Q13613 665 aa20.69■□□□□ 0.9
RGP1-202ENST00000496906 GNPTABQ3T906 1256 aa20.69■□□□□ 0.9
RGP1-202ENST00000496906 ARL6IP4Q66PJ3 421 aaKnown RBP20.69■□□□□ 0.9
RGP1-202ENST00000496906 TMEM87AQ8NBN3 555 aa20.69■□□□□ 0.9
RGP1-202ENST00000496906 HAS1Q92839 578 aa20.69■□□□□ 0.9
RGP1-202ENST00000496906 KCNH7Q9NS40 1196 aa20.69■□□□□ 0.9
RGP1-202ENST00000496906 FLRT1Q9NZU1 646 aa20.69■□□□□ 0.9
RGP1-202ENST00000496906 SRRDQ9UH36 339 aa20.69■□□□□ 0.9
RGP1-202ENST00000496906 ELP1O95163 1332 aa20.69■□□□□ 0.9
RGP1-202ENST00000496906 SNAI1O95863 264 aaPredicted RBP20.68■□□□□ 0.9
RGP1-202ENST00000496906 IGHA2P01877 340 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 PRPHP41219 470 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 SEMA3FQ13275 785 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 CCL14Q16627 93 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.68■□□□□ 0.9
RGP1-202ENST00000496906 FOXN1O15353 648 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 MAFGO15525 162 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 ICAM3P32942 547 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 ARHGEF6Q15052 776 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 CSPP1Q1MSJ5 1256 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 EEPD1Q7L9B9 569 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 FBXO16Q8IX29 292 aaPredicted RBP20.68■□□□□ 0.9
RGP1-202ENST00000496906 KATNBL1Q9H079 304 aa20.68■□□□□ 0.9
RGP1-202ENST00000496906 FBXO2Q9UK22 296 aaPredicted RBP20.68■□□□□ 0.9
RGP1-202ENST00000496906 MCM3APO60318 1980 aa20.67■□□□□ 0.9
RGP1-202ENST00000496906 IRF5Q13568 498 aa20.67■□□□□ 0.9
RGP1-202ENST00000496906 SLFN12Q8IYM2 578 aa20.67■□□□□ 0.9
RGP1-202ENST00000496906 GJA10Q969M2 543 aa20.67■□□□□ 0.9
RGP1-202ENST00000496906 CDHR1Q96JP9 859 aa20.67■□□□□ 0.9
RGP1-202ENST00000496906 FAM20AQ96MK3 541 aa20.67■□□□□ 0.9
RGP1-202ENST00000496906 AGO4Q9HCK5 861 aaKnown RBP20.67■□□□□ 0.9
RGP1-202ENST00000496906 VTA1Q9NP79 307 aa20.67■□□□□ 0.9
RGP1-202ENST00000496906 SRPRBQ9Y5M8 271 aaKnown RBP20.67■□□□□ 0.9
RGP1-202ENST00000496906 CASP8AP2Q9UKL3 1982 aa20.66■□□□□ 0.9
RGP1-202ENST00000496906 SPATA31C2B4DYI2 1134 aa20.66■□□□□ 0.9
RGP1-202ENST00000496906 ME1P48163 572 aa20.66■□□□□ 0.9
RGP1-202ENST00000496906 IL17AQ16552 155 aa20.66■□□□□ 0.9
RGP1-202ENST00000496906 SEPT14Q6ZU15 432 aa20.66■□□□□ 0.9
RGP1-202ENST00000496906 KRI1Q8N9T8 703 aaKnown RBP20.66■□□□□ 0.9
RGP1-202ENST00000496906 SLC5A5Q92911 643 aa20.66■□□□□ 0.9
RGP1-202ENST00000496906 FERMT2Q96AC1 680 aa20.66■□□□□ 0.9
RGP1-202ENST00000496906 UIMC1Q96RL1 719 aa20.66■□□□□ 0.9
RGP1-202ENST00000496906 ZNF577Q9BSK1 485 aa20.66■□□□□ 0.9
RGP1-202ENST00000496906 PCDHA7Q9UN72 937 aa20.66■□□□□ 0.9
RGP1-202ENST00000496906 IPO5O00410 1097 aaKnown RBP20.65■□□□□ 0.9
RGP1-202ENST00000496906 MARCH6O60337 910 aa20.65■□□□□ 0.9
RGP1-202ENST00000496906 HSPA8P11142 646 aaKnown RBP20.65■□□□□ 0.9
RGP1-202ENST00000496906 TXKP42681 527 aa20.65■□□□□ 0.9
RGP1-202ENST00000496906 GRIN1Q05586 938 aa20.65■□□□□ 0.9
RGP1-202ENST00000496906 DTHD1Q6ZMT9 781 aa20.65■□□□□ 0.9
RGP1-202ENST00000496906 TRIB2Q92519 343 aa20.65■□□□□ 0.9
RGP1-202ENST00000496906 ABHD16BQ9H3Z7 469 aa20.65■□□□□ 0.9
RGP1-202ENST00000496906 VWA3AA6NCI4 1184 aa20.64■□□□□ 0.9
RGP1-202ENST00000496906 ATP9AO75110 1047 aa20.64■□□□□ 0.9
RGP1-202ENST00000496906 CYP2C19P33261 490 aa20.64■□□□□ 0.9
RGP1-202ENST00000496906 PRMT2P55345 433 aa20.64■□□□□ 0.9
RGP1-202ENST00000496906 ITGB3BPQ13352 177 aaPredicted RBP20.64■□□□□ 0.9
RGP1-202ENST00000496906 AXDND1Q5T1B0 1012 aaPredicted RBP20.64■□□□□ 0.9
RGP1-202ENST00000496906 TAPT1Q6NXT6 567 aa20.64■□□□□ 0.9
RGP1-202ENST00000496906 GOLGA6L22H0YM25 854 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 PSMD10O75832 226 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 KCNA2P16389 499 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 MCM4P33991 863 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 FXR2P51116 673 aaKnown RBP eCLIP20.63■□□□□ 0.89
RGP1-202ENST00000496906 ACVR2BQ13705 512 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 OTOP1Q7RTM1 612 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 TRMT44Q8IYL2 757 aaKnown RBP20.63■□□□□ 0.89
RGP1-202ENST00000496906 CLIC6Q96NY7 704 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 TTC12Q9H892 705 aaPredicted RBP20.63■□□□□ 0.89
RGP1-202ENST00000496906 PKD2L1Q9P0L9 805 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 KIAA1217Q5T5P2 1943 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 RBM47A0AV96 593 aaKnown RBP20.63■□□□□ 0.89
RGP1-202ENST00000496906 DHX15O43143 795 aaKnown RBP20.63■□□□□ 0.89
RGP1-202ENST00000496906 CUTAO60888 179 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 PRPF40AO75400 957 aaKnown RBP20.63■□□□□ 0.89
RGP1-202ENST00000496906 TGFB3P10600 412 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 CTCFP49711 727 aaPredicted RBP20.63■□□□□ 0.89
RGP1-202ENST00000496906 TMEM266Q2M3C6 531 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 LRCH2Q5VUJ6 765 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 KCNV1Q6PIU1 500 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 SCFD2Q8WU76 684 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 RIT2Q99578 217 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 SENP7Q9BQF6 1050 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 PDGFCQ9NRA1 345 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 VAV3Q9UKW4 847 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 PCDHA12Q9UN75 941 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 TRIM17Q9Y577 477 aa20.63■□□□□ 0.89
RGP1-202ENST00000496906 GAS7O60861 476 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 ARIH2O95376 493 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 TECP42680 631 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 SP2Q02086 613 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 SPIRE1Q08AE8 756 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 ADALQ6DHV7 355 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 CCDC62Q6P9F0 684 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 IGSF22Q8N9C0 903 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 RAET1EQ8TD07 263 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 CSRNP2Q9H175 543 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 TBC1D22BQ9NU19 505 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 LMBRD1Q9NUN5 540 aa20.62■□□□□ 0.89
RGP1-202ENST00000496906 ZHX1Q9UKY1 873 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms