RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FAM173BQ6P4H8 233 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 KCNH7Q9NS40 1196 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 PCDHB6Q9Y5E3 794 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 SPATA31C2B4DYI2 1134 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 WNT7AO00755 349 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 NEMFO60524 1076 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 TRIM32Q13049 653 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 MAP3K21Q5TCX8 1036 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 ATL3Q6DD88 541 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 IQSEC1Q6DN90 963 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 LENG9Q96B70 501 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.67■■□□□ 1.54
C9orf3-222ENST00000496567 SLC37A4O43826 429 aa24.66■■□□□ 1.54
C9orf3-222ENST00000496567 NBR1Q14596 966 aa24.66■■□□□ 1.54
C9orf3-222ENST00000496567 CCDC144BQ3MJ40 725 aa24.66■■□□□ 1.54
C9orf3-222ENST00000496567 PDGFCQ9NRA1 345 aa24.66■■□□□ 1.54
C9orf3-222ENST00000496567 FAM184BQ9ULE4 1060 aa24.66■■□□□ 1.54
C9orf3-222ENST00000496567 CEP131Q9UPN4 1083 aa24.66■■□□□ 1.54
C9orf3-222ENST00000496567 BMP15O95972 392 aa24.65■■□□□ 1.54
C9orf3-222ENST00000496567 ARP10275 920 aa24.65■■□□□ 1.54
C9orf3-222ENST00000496567 SH3TC2Q8TF17 1288 aa24.65■■□□□ 1.54
C9orf3-222ENST00000496567 TBX3O15119 743 aa24.64■■□□□ 1.54
C9orf3-222ENST00000496567 TXNP10599 105 aaKnown RBP24.64■■□□□ 1.54
C9orf3-222ENST00000496567 AKR1A1P14550 325 aa24.64■■□□□ 1.54
C9orf3-222ENST00000496567 ADCYAP1R1P41586 468 aa24.64■■□□□ 1.54
C9orf3-222ENST00000496567 SEMA3FQ13275 785 aa24.64■■□□□ 1.54
C9orf3-222ENST00000496567 POTEDQ86YR6 584 aa24.64■■□□□ 1.54
C9orf3-222ENST00000496567 TRPV1Q8NER1 839 aa24.64■■□□□ 1.54
C9orf3-222ENST00000496567 SENP7Q9BQF6 1050 aa24.64■■□□□ 1.54
C9orf3-222ENST00000496567 ZNF577Q9BSK1 485 aa24.64■■□□□ 1.54
C9orf3-222ENST00000496567 AGO4Q9HCK5 861 aaKnown RBP24.64■■□□□ 1.54
C9orf3-222ENST00000496567 MYH15Q9Y2K3 1946 aa24.64■■□□□ 1.53
C9orf3-222ENST00000496567 LAD1O00515 517 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 MARCH6O60337 910 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 BAG4O95429 457 aaKnown RBP24.63■■□□□ 1.53
C9orf3-222ENST00000496567 CNGA1P29973 690 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 CALCRLQ16602 461 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 FOXD4L6Q3SYB3 417 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-222ENST00000496567 ANO1Q5XXA6 986 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 CCDC62Q6P9F0 684 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 FOXD4L3Q6VB84 417 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-222ENST00000496567 GIMAP8Q8ND71 665 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-222ENST00000496567 FAM20AQ96MK3 541 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 HMX1Q9NP08 348 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-222ENST00000496567 KCNMB3Q9NPA1 279 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 DDX41Q9UJV9 622 aaKnown RBP24.63■■□□□ 1.53
C9orf3-222ENST00000496567 CFAP45Q9UL16 551 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 IPO5O00410 1097 aaKnown RBP24.63■■□□□ 1.53
C9orf3-222ENST00000496567 NKRFO15226 690 aaKnown RBP eCLIP24.63■■□□□ 1.53
C9orf3-222ENST00000496567 MSH4O15457 936 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 SEPT4O43236 478 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 TNFAIP2Q03169 654 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 NEDD9Q14511 834 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 SF3A1Q15459 793 aaKnown RBP24.63■■□□□ 1.53
C9orf3-222ENST00000496567 DUSP28Q4G0W2 176 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 SLFN12Q8IYM2 578 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 ETNPPLQ8TBG4 499 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 POLR3EQ9NVU0 708 aa24.63■■□□□ 1.53
C9orf3-222ENST00000496567 PTGDRQ13258 359 aa24.62■■□□□ 1.53
C9orf3-222ENST00000496567 LY6KQ17RY6 165 aa24.62■■□□□ 1.53
C9orf3-222ENST00000496567 USP28Q96RU2 1077 aa24.62■■□□□ 1.53
C9orf3-222ENST00000496567 TBC1D22BQ9NU19 505 aa24.62■■□□□ 1.53
C9orf3-222ENST00000496567 ARIH2O95376 493 aa24.61■■□□□ 1.53
C9orf3-222ENST00000496567 KCNA2P16389 499 aa24.61■■□□□ 1.53
C9orf3-222ENST00000496567 CCND3P30281 292 aaPredicted RBP24.61■■□□□ 1.53
C9orf3-222ENST00000496567 DNM1Q05193 864 aaKnown RBP24.61■■□□□ 1.53
C9orf3-222ENST00000496567 SDF4Q9BRK5 362 aa24.61■■□□□ 1.53
C9orf3-222ENST00000496567 CLIC4Q9Y696 253 aa24.61■■□□□ 1.53
C9orf3-222ENST00000496567 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.6■■□□□ 1.53
C9orf3-222ENST00000496567 ATP9AO75110 1047 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 OR52Z1P0C646 297 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 SMPD1P17405 629 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 UBA1P22314 1058 aaKnown RBP24.6■■□□□ 1.53
C9orf3-222ENST00000496567 KRT85P78386 507 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 SP2Q02086 613 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 CEBPZQ03701 1054 aaKnown RBP24.6■■□□□ 1.53
C9orf3-222ENST00000496567 C4orf32Q8N8J7 132 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 SLC5A5Q92911 643 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 MTMR9Q96QG7 549 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 RIT2Q99578 217 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 TMEM60Q9H2L4 133 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 PKD2L1Q9P0L9 805 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 TFIP11Q9UBB9 837 aaKnown RBP24.6■■□□□ 1.53
C9orf3-222ENST00000496567 NFASCO94856 1347 aa24.6■■□□□ 1.53
C9orf3-222ENST00000496567 MSCO60682 206 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 NASPP49321 788 aaPredicted RBP24.59■■□□□ 1.53
C9orf3-222ENST00000496567 ATP2C1P98194 919 aaPredicted RBP24.59■■□□□ 1.53
C9orf3-222ENST00000496567 HAS1Q92839 578 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 FTOQ9C0B1 505 aaKnown RBP eCLIP24.59■■□□□ 1.53
C9orf3-222ENST00000496567 Q9Y3F1 56 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 HTTP42858 3142 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 GAS7O60861 476 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 GGPS1O95749 300 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 GH1P01241 217 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 PRPHP41219 470 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 ITGB3BPQ13352 177 aaPredicted RBP24.59■■□□□ 1.53
C9orf3-222ENST00000496567 LRCH2Q5VUJ6 765 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 DHX37Q8IY37 1157 aaKnown RBP24.59■■□□□ 1.53
C9orf3-222ENST00000496567 ARMC5Q96C12 935 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 MLXIPQ9HAP2 919 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms