RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 MTMR4Q9NYA4 1195 aa10.9□□□□□ -0.66
SURF1-204ENST00000495952 GGA1Q9UJY5 639 aa10.9□□□□□ -0.66
SURF1-204ENST00000495952 CCNL1Q9UK58 526 aaPredicted RBP10.9□□□□□ -0.66
SURF1-204ENST00000495952 CAPN6Q9Y6Q1 641 aa10.9□□□□□ -0.66
SURF1-204ENST00000495952 PSME4Q14997 1843 aa10.9□□□□□ -0.66
SURF1-204ENST00000495952 RGPD3A6NKT7 1758 aaPredicted RBP10.9□□□□□ -0.67
SURF1-204ENST00000495952 RGPD4Q7Z3J3 1758 aa10.9□□□□□ -0.67
SURF1-204ENST00000495952 ATXN2Q99700 1313 aaKnown RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 FRMD3A2A2Y4 597 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 GOLGA6BA6NDN3 693 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 LRRC53A6NM62 1247 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 PDE2AO00408 941 aaPredicted RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 N4BP1O75113 896 aaKnown RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 TFRCP02786 760 aaKnown RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 GOLGA8HP0CJ92 632 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 TXKP42681 527 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 MRPL12P52815 198 aaKnown RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 FAM26FQ5R3K3 315 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 CCDC181Q5TID7 509 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 USP17L2Q6R6M4 530 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 CACNA2D4Q7Z3S7 1137 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 MREGQ8N565 214 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 SPATA4Q8NEY3 305 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 DDX12PQ92771 950 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 RPGRQ92834 1020 aaKnown RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 CUL5Q93034 780 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 DNAJC19Q96DA6 116 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 RBM17Q96I25 401 aaKnown RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 CAPZA3Q96KX2 299 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 MBOAT7Q96N66 472 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 PLIN2Q99541 437 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 MXD3Q9BW11 206 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 RASSF4Q9H2L5 321 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 STIM2Q9P246 746 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 SAP30BPQ9UHR5 308 aaKnown RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 FEZ2Q9UHY8 353 aaPredicted RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 RRP15Q9Y3B9 282 aaKnown RBP10.89□□□□□ -0.67
SURF1-204ENST00000495952 DAAM1Q9Y4D1 1078 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 PCDHGC5Q9Y5F6 944 aa10.89□□□□□ -0.67
SURF1-204ENST00000495952 SLX4Q8IY92 1834 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 MACROD2A1Z1Q3 448 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 MYO1CO00159 1063 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 TBX3O15119 743 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 SLC37A4O43826 429 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 SRGAP2O75044 1071 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 BBOX1O75936 387 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 UFL1O94874 794 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 TTLL1O95922 423 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 COL11A2P13942 1736 aaPredicted RBP10.88□□□□□ -0.67
SURF1-204ENST00000495952 HMGB2P26583 209 aaKnown RBP10.88□□□□□ -0.67
SURF1-204ENST00000495952 HOXA10P31260 410 aaPredicted RBP10.88□□□□□ -0.67
SURF1-204ENST00000495952 GPSM2P81274 684 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 C2orf54Q08AI8 447 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 AP3B2Q13367 1082 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 GRIK5Q16478 980 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 CFAP221Q4G0U5 840 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 SFMBT2Q5VUG0 894 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 HGSNATQ68CP4 663 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 HAUS3Q68CZ6 603 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 RRAGAQ7L523 313 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 TRIM59Q8IWR1 403 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 FAM76AQ8TAV0 307 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 CRAMP1Q96RY5 1269 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 EHD4Q9H223 541 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 MMRN2Q9H8L6 949 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 PLCB1Q9NQ66 1216 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 AIPL1Q9NZN9 384 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 BIN2Q9UBW5 565 aaPredicted RBP10.88□□□□□ -0.67
SURF1-204ENST00000495952 FBXL5Q9UKA1 691 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 ATP6V0A2Q9Y487 856 aa10.88□□□□□ -0.67
SURF1-204ENST00000495952 COL2A1P02458 1487 aaPredicted RBP10.87□□□□□ -0.67
SURF1-204ENST00000495952 CYP3A7-CYP3A51PA0A087WV96 503 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 SRRM3A6NNA2 597 aaPredicted RBP10.87□□□□□ -0.67
SURF1-204ENST00000495952 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 AGPSO00116 658 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 EDIL3O43854 480 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 ZEB2O60315 1214 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 MOCS3O95396 460 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 TDP2O95551 362 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 CYP3A7P24462 503 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 RFC4P35249 363 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 USP11P51784 963 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 GYS2P54840 703 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 SKOR1P84550 965 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 CYP27A1Q02318 531 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 PAK2Q13177 524 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 NFIXQ14938 502 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 SLC18A3Q16572 532 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 IFI16Q16666 785 aaKnown RBP10.87□□□□□ -0.67
SURF1-204ENST00000495952 CCDC40Q4G0X9 1142 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 MFSD14BQ5SR56 506 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 TRAPPC3LQ5T215 181 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 PRR5LQ6MZQ0 368 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 C8orf74Q6P047 294 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 LRRC31Q6UY01 552 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 CD302Q8IX05 232 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 SLFN12Q8IYM2 578 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 CCDC17Q96LX7 622 aa10.87□□□□□ -0.67
SURF1-204ENST00000495952 FAM207AQ9NSI2 230 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms