RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 GNPTABQ3T906 1256 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 ZNF654Q8IZM8 581 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 SYMPKQ92797 1274 aaKnown RBP21.29■■□□□ 1
CLCNKA-207ENST00000495784 MAP3K14Q99558 947 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 MYL10Q9BUA6 226 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 MLXIPQ9HAP2 919 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 LY9Q9HBG7 655 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 MYO9BQ13459 2157 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 HAS3O00219 553 aa21.28■■□□□ 1
CLCNKA-207ENST00000495784 PRC1O43663 620 aa21.28■■□□□ 1
CLCNKA-207ENST00000495784 PARNO95453 639 aaKnown RBP21.28■■□□□ 1
CLCNKA-207ENST00000495784 CA3P07451 260 aa21.28■■□□□ 1
CLCNKA-207ENST00000495784 HOXD8P13378 290 aaPredicted RBP21.28■■□□□ 1
CLCNKA-207ENST00000495784 CCDC85BQ15834 202 aaPredicted RBP21.28■■□□□ 1
CLCNKA-207ENST00000495784 NFXL1Q6ZNB6 911 aa21.28■■□□□ 1
CLCNKA-207ENST00000495784 DHX38Q92620 1227 aaKnown RBP21.28■■□□□ 1
CLCNKA-207ENST00000495784 RRP36Q96EU6 259 aaKnown RBP21.28■■□□□ 1
CLCNKA-207ENST00000495784 SPZ1Q9BXG8 430 aa21.28■■□□□ 1
CLCNKA-207ENST00000495784 SEC63Q9UGP8 760 aaKnown RBP21.28■■□□□ 1
CLCNKA-207ENST00000495784 BAZ2BQ9UIF8 2168 aaKnown RBP21.28■■□□□ 1
CLCNKA-207ENST00000495784 KIF28PB7ZC32 967 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 CKBP12277 381 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 MCM5P33992 734 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 KCNJ6P48051 423 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 SP2Q02086 613 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 RBL2Q08999 1139 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 PTK7Q13308 1070 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 HERC6Q8IVU3 1022 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 GPKOWQ92917 476 aaPredicted RBP eCLIP21.27■■□□□ 1
CLCNKA-207ENST00000495784 LZTS2Q9BRK4 669 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 MTA3Q9BTC8 594 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 PRDM6Q9NQX0 595 aa21.27■■□□□ 1
CLCNKA-207ENST00000495784 VCANP13611 3396 aa21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 CCDC69A6NI79 296 aa21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 STAM2O75886 525 aa21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 GNAQP50148 359 aa21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 TJAP1Q5JTD0 557 aa21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 TMTC2Q8N394 836 aa21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 SMARCC2Q8TAQ2 1214 aa21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 CUL5Q93034 780 aa21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 TMEM87BQ96K49 555 aa21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 LSG1Q9H089 658 aaKnown RBP21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 FRMPD4Q14CM0 1322 aa21.26■□□□□ 0.99
CLCNKA-207ENST00000495784 NOP56O00567 594 aaKnown RBP21.25■□□□□ 0.99
CLCNKA-207ENST00000495784 SMARCA1P28370 1054 aa21.25■□□□□ 0.99
CLCNKA-207ENST00000495784 ESYT1Q9BSJ8 1104 aa21.25■□□□□ 0.99
CLCNKA-207ENST00000495784 THEGQ9P2T0 379 aa21.25■□□□□ 0.99
CLCNKA-207ENST00000495784 SH2B2O14492 632 aaPredicted RBP21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 SLC27A2O14975 620 aa21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 MRPS9P82933 396 aaKnown RBP21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 ZNF200P98182 395 aaPredicted RBP21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 GPNMBQ14956 572 aa21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 CNKSR3Q6P9H4 555 aa21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 MICALL1Q8N3F8 863 aa21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 ATXN2LQ8WWM7 1075 aaKnown RBP21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 INPP4AQ96PE3 977 aaPredicted RBP21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 C16orf70Q9BSU1 422 aa21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 CERS4Q9HA82 394 aa21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 ANO2Q9NQ90 1003 aa21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 RTEL1Q9NZ71 1219 aa21.24■□□□□ 0.99
CLCNKA-207ENST00000495784 H3BRB1 525 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 FIBPO43427 364 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 TLL1O43897 1013 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 NBNO60934 754 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 CXCL10P02778 98 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 CALM1P0DP23 149 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 CALM2P0DP24 149 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 CALM3P0DP25 149 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 ICAM3P32942 547 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 WDR5P61964 334 aaKnown RBP21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 NEDD9Q14511 834 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 CREB3L3Q68CJ9 461 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 USP17L6PQ6QN14 398 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 METTL7BQ6UX53 244 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 TUT1Q9H6E5 874 aaKnown RBP21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 MYH7BA7E2Y1 1941 aa21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 TRIP12Q14669 1992 aaPredicted RBP21.23■□□□□ 0.99
CLCNKA-207ENST00000495784 CHD7Q9P2D1 2997 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 SPATA31C2B4DYI2 1134 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 GTPBP6O43824 516 aaPredicted RBP21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 PLEKHA8P1O95397 391 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 LGALS2P05162 132 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 RXRAP19793 462 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 TRIM71Q2Q1W2 868 aaKnown RBP21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 ZNF618Q5T7W0 954 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 SRBD1Q8N5C6 995 aaKnown RBP21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 ARNTL2Q8WYA1 636 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 WNT8BQ93098 351 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 ZBED2Q9BTP6 218 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 TSPYL2Q9H2G4 693 aaPredicted RBP21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 BCAS3Q9H6U6 928 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 SLC12A7Q9Y666 1083 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 TET1Q8NFU7 2136 aa21.22■□□□□ 0.99
CLCNKA-207ENST00000495784 ABHD14A-ACY1A0A1B0GW23 586 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 C17orf102A2RUQ5 167 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 PIK3CDO00329 1044 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 THPOP40225 353 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 LIFRP42702 1097 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 TAP1Q03518 808 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 PCNX4Q63HM2 1172 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms