RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 FUT2Q10981 343 aa8.32□□□□□ -1.08
VPS52-221ENST00000495755 KRT32Q14532 448 aa8.32□□□□□ -1.08
VPS52-221ENST00000495755 HSDL1Q3SXM5 330 aa8.32□□□□□ -1.08
VPS52-221ENST00000495755 GDF6Q6KF10 455 aaPredicted RBP8.32□□□□□ -1.08
VPS52-221ENST00000495755 XRRA1Q6P2D8 792 aa8.32□□□□□ -1.08
VPS52-221ENST00000495755 APOA5Q6Q788 366 aa8.32□□□□□ -1.08
VPS52-221ENST00000495755 CCDC82Q8N4S0 544 aa8.32□□□□□ -1.08
VPS52-221ENST00000495755 SCLYQ96I15 445 aa8.32□□□□□ -1.08
VPS52-221ENST00000495755 SPATA33Q96N06 139 aa8.32□□□□□ -1.08
VPS52-221ENST00000495755 CDX2Q99626 313 aaPredicted RBP8.32□□□□□ -1.08
VPS52-221ENST00000495755 BCAS3Q9H6U6 928 aa8.32□□□□□ -1.08
VPS52-221ENST00000495755 PSTPIP2Q9H939 334 aa8.32□□□□□ -1.08
VPS52-221ENST00000495755 hCG_1642624A0A1W2PR95 340 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 ZBTB43O43298 467 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 SORBS3O60504 671 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 PFKMP08237 780 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 HMGB1P09429 215 aaKnown RBP8.31□□□□□ -1.08
VPS52-221ENST00000495755 IQCF3P0C7M6 154 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 DNAJB2P25686 324 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 HSPA4P34932 840 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 RFC2P35250 354 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 PBX2P40425 430 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 CHMP4BP1P59074 171 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 SEMA3FQ13275 785 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 BFSP2Q13515 415 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 MFSD10Q14728 455 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 PTGISQ16647 500 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 GNPTABQ3T906 1256 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 PCNX4Q63HM2 1172 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 SYNE3Q6ZMZ3 975 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 OTOP2Q7RTS6 562 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 MICU3Q86XE3 530 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 RETREG2Q8NC44 543 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 SLC17A8Q8NDX2 589 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 SMARCC2Q8TAQ2 1214 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 DHX38Q92620 1227 aaKnown RBP8.31□□□□□ -1.08
VPS52-221ENST00000495755 CUL5Q93034 780 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 TCEANC2Q96MN5 208 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 C16orf70Q9BSU1 422 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 PBX4Q9BYU1 374 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 FAM217BQ9NTX9 383 aaPredicted RBP8.31□□□□□ -1.08
VPS52-221ENST00000495755 RBM28Q9NW13 759 aaKnown RBP8.31□□□□□ -1.08
VPS52-221ENST00000495755 RTEL1Q9NZ71 1219 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 HDAC6Q9UBN7 1215 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 GTF2IRD1Q9UHL9 959 aa8.31□□□□□ -1.08
VPS52-221ENST00000495755 FIBPO43427 364 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 ZNF286BP0CG31 522 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 RCAN1P53805 252 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 RBL2Q08999 1139 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 NEDD9Q14511 834 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 HIC1Q14526 733 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 GPNMBQ14956 572 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 GRIN2CQ14957 1233 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 RTN1Q16799 776 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 KIAA0753Q2KHM9 967 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 METTL7BQ6UX53 244 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 DEFB128Q7Z7B8 93 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 TEX2Q8IWB9 1127 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 C7orf31Q8N865 590 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 CAGE1Q8TC20 777 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 MYLIPQ8WY64 445 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 TIFAQ96CG3 184 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 SENP7Q9BQF6 1050 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 ALG1Q9BT22 464 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 KATNAL1Q9BW62 490 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 MTIF3Q9H2K0 278 aaKnown RBP8.3□□□□□ -1.08
VPS52-221ENST00000495755 ZNF576Q9H609 170 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 MLXIPQ9HAP2 919 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 NOD1Q9Y239 953 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 TELO2Q9Y4R8 837 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 SNX14Q9Y5W7 946 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 SLC4A7Q9Y6M7 1214 aa8.3□□□□□ -1.08
VPS52-221ENST00000495755 V9GY48 417 aaPredicted RBP8.3□□□□□ -1.08
VPS52-221ENST00000495755 CNTNAP5Q8WYK1 1306 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 KLF18A0A0U1RQI7 1052 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 CKBP12277 381 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 CPA1P15085 419 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 ITGB5P18084 799 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 CDC27P30260 824 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 HOXC8P31273 242 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 ZNF200P98182 395 aaPredicted RBP8.29□□□□□ -1.08
VPS52-221ENST00000495755 PTK7Q13308 1070 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 UBE2SQ16763 222 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 TRIM71Q2Q1W2 868 aaKnown RBP8.29□□□□□ -1.08
VPS52-221ENST00000495755 WWC2Q6AWC2 1192 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 TYW1BQ6NUM6 668 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 TRAF7Q6Q0C0 670 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 CYFIP1Q7L576 1253 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 HEATR3Q7Z4Q2 680 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 NLRX1Q86UT6 975 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 FBXL16Q8N461 479 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 CCDC155Q8N6L0 562 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 AFAP1L1Q8TED9 768 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 WNT8BQ93098 351 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 GPRASP2Q96D09 838 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 JAKMIP1Q96N16 626 aaKnown RBP8.29□□□□□ -1.08
VPS52-221ENST00000495755 GPR20Q99678 358 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 AGXT2Q9BYV1 514 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 MSRAQ9UJ68 235 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 PCDHA6Q9UN73 950 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms