RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 ABCB11O95342 1321 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 ZMYM6O95789 1325 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 H3BQ06 376 aaPredicted RBP15.75■□□□□ 0.11
COL1A1-209ENST00000495677 FGAP02671 866 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 GPM6BQ13491 265 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 CTC1Q2NKJ3 1217 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 VPS53Q5VIR6 699 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 CHST3Q7LGC8 479 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 SERINC5Q86VE9 423 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 MCF2L2Q86YR7 1114 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 MYOCDQ8IZQ8 938 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 RMDN3Q96TC7 470 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 ALG1Q9BT22 464 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 NSUN3Q9H649 340 aaKnown RBP15.75■□□□□ 0.11
COL1A1-209ENST00000495677 HELLSQ9NRZ9 838 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 COL20A1Q9P218 1284 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 TTC3P53804 2025 aa15.75■□□□□ 0.11
COL1A1-209ENST00000495677 RSPH10B2B2RC85 870 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 RSPH10BP0C881 870 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 HOXC8P31273 242 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 LTBRP36941 435 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 NT5C2P49902 561 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 ZNF200P98182 395 aaPredicted RBP15.74■□□□□ 0.11
COL1A1-209ENST00000495677 USH1GQ495M9 461 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 HERC4Q5GLZ8 1057 aaPredicted RBP15.74■□□□□ 0.11
COL1A1-209ENST00000495677 TCEAL5Q5H9L2 206 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 KCNV1Q6PIU1 500 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 BMP8AQ7Z5Y6 402 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 FBXO11Q86XK2 927 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 TMEM192Q8IY95 271 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 SNX27Q96L92 541 aa15.74■□□□□ 0.11
COL1A1-209ENST00000495677 C5orf67F2Z3F1 127 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 CAND2O75155 1236 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 RB1P06400 928 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 NR3C2P08235 984 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 TGFB3P10600 412 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 IRS1P35568 1242 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 GHRHRQ02643 423 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 HIC1Q14526 733 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 SMAD2Q15796 467 aaKnown RBP15.73■□□□□ 0.11
COL1A1-209ENST00000495677 MYSM1Q5VVJ2 828 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 HFE2Q6ZVN8 426 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 DGKHQ86XP1 1220 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 DHX37Q8IY37 1157 aaKnown RBP15.73■□□□□ 0.11
COL1A1-209ENST00000495677 POP1Q99575 1024 aaKnown RBP15.73■□□□□ 0.11
COL1A1-209ENST00000495677 LMAN2LQ9H0V9 348 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 TOMM22Q9NS69 142 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 MAP3K20Q9NYL2 800 aaKnown RBP15.73■□□□□ 0.11
COL1A1-209ENST00000495677 DOCK5Q9H7D0 1870 aa15.73■□□□□ 0.11
COL1A1-209ENST00000495677 RRP12Q5JTH9 1297 aaKnown RBP15.72■□□□□ 0.11
COL1A1-209ENST00000495677 ARHGEF16Q5VV41 709 aa15.72■□□□□ 0.11
COL1A1-209ENST00000495677 SAMD3Q8N6K7 520 aa15.72■□□□□ 0.11
COL1A1-209ENST00000495677 SEPT8Q92599 483 aa15.72■□□□□ 0.11
COL1A1-209ENST00000495677 YME1L1Q96TA2 773 aa15.72■□□□□ 0.11
COL1A1-209ENST00000495677 C16orf70Q9BSU1 422 aa15.72■□□□□ 0.11
COL1A1-209ENST00000495677 MRPL11Q9Y3B7 192 aaKnown RBP15.72■□□□□ 0.11
COL1A1-209ENST00000495677 MRVI1Q9Y6F6 885 aa15.72■□□□□ 0.11
COL1A1-209ENST00000495677 LOXHD1Q8IVV2 1947 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.71■□□□□ 0.11
COL1A1-209ENST00000495677 ZNF286BP0CG31 522 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 HSPD1P10809 573 aaKnown RBP15.71■□□□□ 0.11
COL1A1-209ENST00000495677 THPOP40225 353 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 PKN1Q16512 942 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 CDC37Q16543 378 aaPredicted RBP15.71■□□□□ 0.11
COL1A1-209ENST00000495677 HSDL1Q3SXM5 330 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 CELF3Q5SZQ8 465 aaKnown RBP15.71■□□□□ 0.11
COL1A1-209ENST00000495677 C20orf194Q5TEA3 1177 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 APBB2Q92870 758 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 EVI5LQ96CN4 794 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 PRRX2Q99811 253 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 UBA5Q9GZZ9 404 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 PXMP2Q9NR77 195 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 CLDND1Q9NY35 253 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 KMT2EQ8IZD2 1858 aa15.71■□□□□ 0.11
COL1A1-209ENST00000495677 LAMA4Q16363 1823 aa15.71■□□□□ 0.1
COL1A1-209ENST00000495677 SALL3Q9BXA9 1300 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 MBTPS2O43462 519 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 RGS20O76081 388 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 MX1P20591 662 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 MCMDC2Q4G0Z9 681 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 CCDC178Q5BJE1 867 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 MFSD6Q6ZSS7 791 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 RPAINQ86UA6 219 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 ADGRF4Q8IZF3 695 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 ANKS1AQ92625 1134 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 EDAQ92838 391 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 RCAN3Q9UKA8 241 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 RWDD3Q9Y3V2 267 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 USP34Q70CQ2 3546 aa15.7■□□□□ 0.1
COL1A1-209ENST00000495677 KIAA1671Q9BY89 1806 aa15.69■□□□□ 0.1
COL1A1-209ENST00000495677 C17orf102A2RUQ5 167 aa15.69■□□□□ 0.1
COL1A1-209ENST00000495677 LINC00271P0C7V0 271 aa15.69■□□□□ 0.1
COL1A1-209ENST00000495677 GOLGA8HP0CJ92 632 aa15.69■□□□□ 0.1
COL1A1-209ENST00000495677 EIF2AK2P19525 551 aaKnown RBP15.69■□□□□ 0.1
COL1A1-209ENST00000495677 HSD17B4P51659 736 aa15.69■□□□□ 0.1
COL1A1-209ENST00000495677 STOX1Q6ZVD7 989 aa15.69■□□□□ 0.1
COL1A1-209ENST00000495677 VSIG10LQ86VR7 867 aa15.69■□□□□ 0.1
COL1A1-209ENST00000495677 OTUD7AQ8TE49 926 aaPredicted RBP15.69■□□□□ 0.1
COL1A1-209ENST00000495677 ATP6V0A1Q93050 837 aa15.69■□□□□ 0.1
COL1A1-209ENST00000495677 RNPEPQ9H4A4 650 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms