RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 EMID1Q96A84 441 aaPredicted RBP19.6■□□□□ 0.73
SNX17-209ENST00000494893 GLT8D2Q9H1C3 349 aa19.6■□□□□ 0.73
SNX17-209ENST00000494893 C6orf50Q9HD87 102 aa19.6■□□□□ 0.73
SNX17-209ENST00000494893 GJB4Q9NTQ9 266 aa19.6■□□□□ 0.73
SNX17-209ENST00000494893 LIMCH1Q9UPQ0 1083 aa19.6■□□□□ 0.73
SNX17-209ENST00000494893 ATP11BQ9Y2G3 1177 aa19.6■□□□□ 0.73
SNX17-209ENST00000494893 TELO2Q9Y4R8 837 aa19.6■□□□□ 0.73
SNX17-209ENST00000494893 JAK2O60674 1132 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 CDKL5O76039 1030 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 CD2BP2O95400 341 aaKnown RBP19.59■□□□□ 0.73
SNX17-209ENST00000494893 GGPS1O95749 300 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 MMP3P08254 477 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 TGFB3P10600 412 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 CPT1AP50416 773 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 CDK7P50613 346 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 PURAQ00577 322 aaKnown RBP19.59■□□□□ 0.73
SNX17-209ENST00000494893 CELF3Q5SZQ8 465 aaKnown RBP19.59■□□□□ 0.73
SNX17-209ENST00000494893 MYSM1Q5VVJ2 828 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 SLC43A3Q8NBI5 491 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 CCDC148Q8NFR7 591 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 CYP2W1Q8TAV3 490 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 GLT1D1Q96MS3 346 aa19.59■□□□□ 0.73
SNX17-209ENST00000494893 ZMYND8Q9ULU4 1186 aaPredicted RBP19.59■□□□□ 0.73
SNX17-209ENST00000494893 M0R2N6 131 aa19.58■□□□□ 0.72
SNX17-209ENST00000494893 FIBPO43427 364 aa19.58■□□□□ 0.72
SNX17-209ENST00000494893 ATP9AO75110 1047 aa19.58■□□□□ 0.72
SNX17-209ENST00000494893 MYL3P08590 195 aa19.58■□□□□ 0.72
SNX17-209ENST00000494893 PSMC6P62333 389 aa19.58■□□□□ 0.72
SNX17-209ENST00000494893 TLE2Q04725 743 aa19.58■□□□□ 0.72
SNX17-209ENST00000494893 GNPTABQ3T906 1256 aa19.58■□□□□ 0.72
SNX17-209ENST00000494893 KCNV1Q6PIU1 500 aa19.58■□□□□ 0.72
SNX17-209ENST00000494893 REXO1Q8N1G1 1221 aaKnown RBP19.58■□□□□ 0.72
SNX17-209ENST00000494893 ORC3Q9UBD5 711 aaPredicted RBP19.58■□□□□ 0.72
SNX17-209ENST00000494893 NR2E3Q9Y5X4 410 aa19.58■□□□□ 0.72
SNX17-209ENST00000494893 A0A0U1RQG5 324 aaPredicted RBP19.57■□□□□ 0.72
SNX17-209ENST00000494893 HOXD8P13378 290 aaPredicted RBP19.57■□□□□ 0.72
SNX17-209ENST00000494893 SYN1P17600 705 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 GNA11P29992 359 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 NLRP5P59047 1200 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 ARHGAP4P98171 946 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 HSDL1Q3SXM5 330 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 DHX37Q8IY37 1157 aaKnown RBP19.57■□□□□ 0.72
SNX17-209ENST00000494893 PPP1R13LQ8WUF5 828 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 GPRASP2Q96D09 838 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 MXRA8Q9BRK3 442 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 JADE2Q9NQC1 790 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 POLR3EQ9NVU0 708 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 KCNJ14Q9UNX9 436 aa19.57■□□□□ 0.72
SNX17-209ENST00000494893 ARVCFO00192 962 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 ZEB2O60315 1214 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 CABYRO75952 493 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 KCNA2P16389 499 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 LAMC2Q13753 1193 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 ANKRD33Q7Z3H0 272 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 SH3RF1Q7Z6J0 888 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 NLRX1Q86UT6 975 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 CCDC83Q8IWF9 413 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 DAGLBQ8NCG7 672 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 PPTC7Q8NI37 304 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 KAT2BQ92831 832 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 SNX21Q969T3 373 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 PHF20Q9BVI0 1012 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 EHMT1Q9H9B1 1298 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 PDLIM7Q9NR12 457 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 PCDHA4Q9UN74 947 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 CEP290O15078 2479 aa19.56■□□□□ 0.72
SNX17-209ENST00000494893 FAM86B1E9PN63 330 aa19.55■□□□□ 0.72
SNX17-209ENST00000494893 PQBP1O60828 265 aaKnown RBP19.55■□□□□ 0.72
SNX17-209ENST00000494893 CYP3A4P08684 503 aa19.55■□□□□ 0.72
SNX17-209ENST00000494893 FAM86B2P0C5J1 330 aa19.55■□□□□ 0.72
SNX17-209ENST00000494893 ITGA7Q13683 1181 aa19.55■□□□□ 0.72
SNX17-209ENST00000494893 CYFIP1Q7L576 1253 aa19.55■□□□□ 0.72
SNX17-209ENST00000494893 BLIDQ8IZY5 108 aa19.55■□□□□ 0.72
SNX17-209ENST00000494893 VTI1AQ96AJ9 217 aa19.55■□□□□ 0.72
SNX17-209ENST00000494893 SPATA33Q96N06 139 aa19.55■□□□□ 0.72
SNX17-209ENST00000494893 SENP7Q9BQF6 1050 aa19.55■□□□□ 0.72
SNX17-209ENST00000494893 MTG1Q9BT17 334 aaPredicted RBP19.55■□□□□ 0.72
SNX17-209ENST00000494893 IGLV3-22A0A075B6J6 115 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 TRIM43BA6NCK2 446 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 MEIS1O00470 390 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 ST18O60284 1047 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 ARP10275 920 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 FAAP100Q0VG06 881 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 MTMR1Q13613 665 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 CEP55Q53EZ4 464 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 FAM126BQ8IXS8 530 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 FAM177A1Q8N128 213 aaPredicted RBP19.54■□□□□ 0.72
SNX17-209ENST00000494893 BICD2Q8TD16 824 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 TRIM43Q96BQ3 446 aaPredicted RBP19.54■□□□□ 0.72
SNX17-209ENST00000494893 ZSCAN31Q96LW9 406 aaPredicted RBP19.54■□□□□ 0.72
SNX17-209ENST00000494893 ALG1Q9BT22 464 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 KCNH7Q9NS40 1196 aa19.54■□□□□ 0.72
SNX17-209ENST00000494893 KPNA6O60684 536 aa19.53■□□□□ 0.72
SNX17-209ENST00000494893 NEDD9Q14511 834 aa19.53■□□□□ 0.72
SNX17-209ENST00000494893 NBPF20Q3BBV1 942 aa19.53■□□□□ 0.72
SNX17-209ENST00000494893 BRDTQ58F21 947 aaPredicted RBP19.53■□□□□ 0.72
SNX17-209ENST00000494893 MCTP2Q6DN12 878 aa19.53■□□□□ 0.72
SNX17-209ENST00000494893 METTL7BQ6UX53 244 aa19.53■□□□□ 0.72
SNX17-209ENST00000494893 OXER1Q8TDS5 423 aa19.53■□□□□ 0.72
SNX17-209ENST00000494893 TOX2Q96NM4 488 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms