RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 USP17L6PQ6QN14 398 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 OTOP2Q7RTS6 562 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 DHX37Q8IY37 1157 aaKnown RBP9.87□□□□□ -0.83
LRCH3-219ENST00000494069 RRP36Q96EU6 259 aaKnown RBP9.87□□□□□ -0.83
LRCH3-219ENST00000494069 CCDC136Q96JN2 1154 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 NEK1Q96PY6 1258 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 MTA3Q9BTC8 594 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 MAP3K20Q9NYL2 800 aaKnown RBP9.87□□□□□ -0.83
LRCH3-219ENST00000494069 RTEL1Q9NZ71 1219 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 BRPF3Q9ULD4 1205 aa9.87□□□□□ -0.83
LRCH3-219ENST00000494069 CDH23Q9H251 3354 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 EYSQ5T1H1 3165 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 KIAA1217Q5T5P2 1943 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 MEIS2O14770 477 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 GGPS1O95749 300 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 FGBP02675 491 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 ZNF286BP0CG31 522 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 UBA1P22314 1058 aaKnown RBP9.86□□□□□ -0.83
LRCH3-219ENST00000494069 DNAJB2P25686 324 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 CCND2P30279 289 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 KIF5BP33176 963 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 ZNF200P98182 395 aaPredicted RBP9.86□□□□□ -0.83
LRCH3-219ENST00000494069 EXOSC10Q01780 885 aaKnown RBP9.86□□□□□ -0.83
LRCH3-219ENST00000494069 SEMA3FQ13275 785 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 LAMC2Q13753 1193 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 HIC1Q14526 733 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 CELF3Q5SZQ8 465 aaKnown RBP9.86□□□□□ -0.83
LRCH3-219ENST00000494069 MYSM1Q5VVJ2 828 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 NFRKBQ6P4R8 1299 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 DEFB128Q7Z7B8 93 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 MICU3Q86XE3 530 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 TMTC2Q8N394 836 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 SAMD3Q8N6K7 520 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 FANCBQ8NB91 859 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 SLC17A8Q8NDX2 589 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 MYLIPQ8WY64 445 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 HERVK_113Q902F9 699 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 ALG1Q9BT22 464 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 SEZ6LQ9BYH1 1024 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 PBX4Q9BYU1 374 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 HDAC6Q9UBN7 1215 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 SLC12A7Q9Y666 1083 aa9.86□□□□□ -0.83
LRCH3-219ENST00000494069 FRMPD4Q14CM0 1322 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 A0A0C4DFX4 3053 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 IQCF3P0C7M6 154 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 SUPT20HL2P0C7V6 817 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 CASTP20810 708 aaKnown RBP9.85□□□□□ -0.83
LRCH3-219ENST00000494069 SMARCA1P28370 1054 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 PSEN2P49810 448 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 GNAQP50148 359 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 RABGGTBP53611 331 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 TRAF1Q13077 416 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 GPNMBQ14956 572 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 GRIN2CQ14957 1233 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 DGKDQ16760 1214 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 UBE2SQ16763 222 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 PSRC1Q6PGN9 363 aaPredicted RBP9.85□□□□□ -0.83
LRCH3-219ENST00000494069 APOA5Q6Q788 366 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 TMTC3Q6ZXV5 915 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 DHX32Q7L7V1 743 aaKnown RBP9.85□□□□□ -0.83
LRCH3-219ENST00000494069 SGMS1Q86VZ5 419 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 PPTC7Q8NI37 304 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 SMARCC2Q8TAQ2 1214 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 DHX38Q92620 1227 aaKnown RBP9.85□□□□□ -0.83
LRCH3-219ENST00000494069 WNT8BQ93098 351 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 EMID1Q96A84 441 aaPredicted RBP9.85□□□□□ -0.83
LRCH3-219ENST00000494069 SPATA33Q96N06 139 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 LZTS2Q9BRK4 669 aa9.85□□□□□ -0.83
LRCH3-219ENST00000494069 SEC63Q9UGP8 760 aaKnown RBP9.85□□□□□ -0.83
LRCH3-219ENST00000494069 SCN5AQ14524 2016 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 SPATA31C2B4DYI2 1134 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 HAS3O00219 553 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 F2P00734 622 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 CALM1P0DP23 149 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 CALM2P0DP24 149 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 CALM3P0DP25 149 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 MYOGP15173 224 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 PTPN11Q06124 597 aaPredicted RBP9.84□□□□□ -0.83
LRCH3-219ENST00000494069 MFSD10Q14728 455 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 PTGISQ16647 500 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 KIAA0753Q2KHM9 967 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 TSGA10IPQ3SY00 556 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 RNF20Q5VTR2 975 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 TYW1BQ6NUM6 668 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 SESTD1Q86VW0 696 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 TIFAQ96CG3 184 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 INPP4AQ96PE3 977 aaPredicted RBP9.84□□□□□ -0.83
LRCH3-219ENST00000494069 MLXIPQ9HAP2 919 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 FAM217BQ9NTX9 383 aaPredicted RBP9.84□□□□□ -0.83
LRCH3-219ENST00000494069 GTF2IRD1Q9UHL9 959 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 NOD1Q9Y239 953 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 YBX2Q9Y2T7 364 aaKnown RBP9.84□□□□□ -0.83
LRCH3-219ENST00000494069 MYH7BA7E2Y1 1941 aa9.84□□□□□ -0.83
LRCH3-219ENST00000494069 PRUNE2Q8WUY3 3088 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 KLF18A0A0U1RQI7 1052 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 ZBBXA8MT70 800 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 PIK3CDO00329 1044 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 TGFB3P10600 412 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 HOXD8P13378 290 aaPredicted RBP9.83□□□□□ -0.84
LRCH3-219ENST00000494069 CDC27P30260 824 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms