RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CCND2P30279 289 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 ADD1P35611 737 aaKnown RBP14.55□□□□□ -0.08
HSPG2-212ENST00000493940 GNAQP50148 359 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 ZNF200P98182 395 aaPredicted RBP14.55□□□□□ -0.08
HSPG2-212ENST00000493940 GPNMBQ14956 572 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 FAM47CQ5HY64 1035 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 WWC2Q6AWC2 1192 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 Q6ZUG5 572 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 DHX37Q8IY37 1157 aaKnown RBP14.55□□□□□ -0.08
HSPG2-212ENST00000493940 RNPC3Q96LT9 517 aaKnown RBP14.55□□□□□ -0.08
HSPG2-212ENST00000493940 JAKMIP1Q96N16 626 aaKnown RBP14.55□□□□□ -0.08
HSPG2-212ENST00000493940 LZTS2Q9BRK4 669 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 VCANP13611 3396 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 HAS3O00219 553 aa14.54□□□□□ -0.08
HSPG2-212ENST00000493940 PIK3CDO00329 1044 aa14.54□□□□□ -0.08
HSPG2-212ENST00000493940 ZBTB43O43298 467 aa14.54□□□□□ -0.08
HSPG2-212ENST00000493940 HOXD8P13378 290 aaPredicted RBP14.54□□□□□ -0.08
HSPG2-212ENST00000493940 PBX2P40425 430 aa14.54□□□□□ -0.08
HSPG2-212ENST00000493940 ZNF697Q5TEC3 545 aa14.54□□□□□ -0.08
HSPG2-212ENST00000493940 NFRKBQ6P4R8 1299 aa14.54□□□□□ -0.08
HSPG2-212ENST00000493940 DHX38Q92620 1227 aaKnown RBP14.54□□□□□ -0.08
HSPG2-212ENST00000493940 WNT8BQ93098 351 aa14.54□□□□□ -0.08
HSPG2-212ENST00000493940 INPP4AQ96PE3 977 aaPredicted RBP14.54□□□□□ -0.08
HSPG2-212ENST00000493940 USP26Q9BXU7 913 aa14.54□□□□□ -0.08
HSPG2-212ENST00000493940 IL23AQ9NPF7 189 aa14.54□□□□□ -0.08
HSPG2-212ENST00000493940 V9GY48 417 aaPredicted RBP14.54□□□□□ -0.08
HSPG2-212ENST00000493940 SIP14410 1827 aa14.54□□□□□ -0.08
HSPG2-212ENST00000493940 EVPLQ92817 2033 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 SPATA31C2B4DYI2 1134 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 KPNA6O60684 536 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 ATP9AO75110 1047 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 PPFIA3O75145 1194 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 CASTP20810 708 aaKnown RBP14.53□□□□□ -0.08
HSPG2-212ENST00000493940 ICAM3P32942 547 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 PSEN2P49810 448 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 PPIGQ13427 754 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■■□□□ 11.5
HSPG2-212ENST00000493940 LAMC2Q13753 1193 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 RTN1Q16799 776 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 TMEM199Q8N511 208 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 PPTC7Q8NI37 304 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 SMARCC2Q8TAQ2 1214 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 BRF1Q92994 677 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 PGBD1Q96JS3 809 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 CDX2Q99626 313 aaPredicted RBP14.53□□□□□ -0.08
HSPG2-212ENST00000493940 C16orf70Q9BSU1 422 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 ALG1Q9BT22 464 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 AGXT2Q9BYV1 514 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 SEMA6BQ9H3T3 888 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 PSTPIP2Q9H939 334 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 PPP4R2Q9NY27 417 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 HDAC6Q9UBN7 1215 aa14.53□□□□□ -0.08
HSPG2-212ENST00000493940 SEC63Q9UGP8 760 aaKnown RBP14.53□□□□□ -0.08
HSPG2-212ENST00000493940 ITGB5P18084 799 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 RPS6KB1P23443 525 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 SMAD3P84022 425 aaKnown RBP14.52□□□□□ -0.09
HSPG2-212ENST00000493940 TRAF1Q13077 416 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 KRT32Q14532 448 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 DGKDQ16760 1214 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 TCTN1Q2MV58 587 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 PCNX4Q63HM2 1172 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 OTOP2Q7RTS6 562 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 HEATR3Q7Z4Q2 680 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 SPATA33Q96N06 139 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 LARP6Q9BRS8 491 aaKnown RBP14.52□□□□□ -0.09
HSPG2-212ENST00000493940 SEZ6LQ9BYH1 1024 aa14.52□□□□□ -0.09
HSPG2-212ENST00000493940 SPTBN5Q9NRC6 3674 aaKnown RBP14.51□□□□□ -0.09
HSPG2-212ENST00000493940 MYH9P35579 1960 aaKnown RBP14.51□□□□□ -0.09
HSPG2-212ENST00000493940 GOLGA8AA7E2F4 631 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 GOLGA8BA8MQT2 603 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 STXBP3O00186 592 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 F2P00734 622 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 TGFB3P10600 412 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 TOB2Q14106 344 aaPredicted RBP14.51□□□□□ -0.09
HSPG2-212ENST00000493940 MFSD10Q14728 455 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 PKN1Q16512 942 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 PTGISQ16647 500 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 KIAA0753Q2KHM9 967 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 BRDTQ58F21 947 aaPredicted RBP14.51□□□□□ -0.09
HSPG2-212ENST00000493940 CYFIP1Q7L576 1253 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 DEFB128Q7Z7B8 93 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 SESTD1Q86VW0 696 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 CYP2W1Q8TAV3 490 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 HERVK_113Q902F9 699 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 OSBPL7Q9BZF2 842 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 TMEM260Q9NX78 707 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 GTF2IRD1Q9UHL9 959 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 PCDHA6Q9UN73 950 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 PCDHA8Q9Y5H6 950 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 MICAL3Q7RTP6 2002 aa14.51□□□□□ -0.09
HSPG2-212ENST00000493940 DTNBO60941 627 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 PPFIA4O75335 1185 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 FGBP02675 491 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 NEFLP07196 543 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 IQCF3P0C7M6 154 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 PTPN11Q06124 597 aaPredicted RBP14.5□□□□□ -0.09
HSPG2-212ENST00000493940 NTRK3Q16288 839 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 TRIM71Q2Q1W2 868 aaKnown RBP14.5□□□□□ -0.09
HSPG2-212ENST00000493940 TRAF7Q6Q0C0 670 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 BLOC1S2Q6QNY1 142 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 SYNE3Q6ZMZ3 975 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms