RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 KCNF1Q9H3M0 494 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 SEMA6CQ9H3T2 930 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 C14orf119Q9NWQ9 140 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 OXSMQ9NWU1 459 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 MKS1Q9NXB0 559 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 STOML1Q9UBI4 398 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 TMEFF2Q9UIK5 374 aaPredicted RBP5.65□□□□□ -1.5
GTF3A-208ENST00000493903 ZBTB21Q9ULJ3 1066 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 TPX2Q9ULW0 747 aaKnown RBP5.65□□□□□ -1.5
GTF3A-208ENST00000493903 RAXQ9Y2V3 346 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 DAGLAQ9Y4D2 1042 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 CCDC189A1A4V9 331 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 HMX2A2RU54 273 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 MSCO60682 206 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 PLS3P13797 630 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 HSPA6P17066 643 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 AKAP5P24588 427 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 MAP4P27816 1152 aaKnown RBP5.64□□□□□ -1.51
GTF3A-208ENST00000493903 LACTBP83111 547 aaPredicted RBP5.64□□□□□ -1.51
GTF3A-208ENST00000493903 LRRC32Q14392 662 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 ARHGAP29Q52LW3 1261 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 SFRP5Q5T4F7 317 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 BROXQ5VW32 411 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 IL31Q6EBC2 164 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 C22orf34Q6ZV56 151 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 AMOTL1Q8IY63 956 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 GIMAP7Q8NHV1 300 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 PIWIL2Q8TC59 973 aaKnown RBP5.64□□□□□ -1.51
GTF3A-208ENST00000493903 RUNDC1Q96C34 613 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 TIFAQ96CG3 184 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 Q96M66 194 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 HDAC8Q9BY41 377 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 C7orf69Q9H7B7 122 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 NMRK2Q9NPI5 230 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 DDX21Q9NR30 783 aaKnown RBP eCLIP5.64□□□□□ -1.51
GTF3A-208ENST00000493903 C1orf112Q9NSG2 853 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 GNL3LQ9NVN8 582 aaKnown RBP5.64□□□□□ -1.51
GTF3A-208ENST00000493903 TAGLN3Q9UI15 199 aa5.64□□□□□ -1.51
GTF3A-208ENST00000493903 KLHL33A6NCF5 533 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 TGM5O43548 720 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 IL33O95760 270 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 FGAP02671 866 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 ASGR2P07307 311 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 PAMP19021 973 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 FSTP19883 344 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 GRK2P25098 689 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 LSP1P33241 339 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 DNM2P50570 870 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 ZNF280AP59817 542 aaPredicted RBP5.63□□□□□ -1.51
GTF3A-208ENST00000493903 RAPGEF1Q13905 1077 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 GRM3Q14832 879 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 TERF2Q15554 542 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 CRY1Q16526 586 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 GRAMD1BQ3KR37 738 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 COBLL1Q53SF7 1204 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 EFCAB2Q5VUJ9 269 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 CDPF1Q6NVV7 123 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 CRTC3Q6UUV7 619 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 SEZ6L2Q6UXD5 910 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 BEND4Q6ZU67 534 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 RCBTB1Q8NDN9 531 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 SSH1Q8WYL5 1049 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 ELAC2Q9BQ52 826 aaKnown RBP5.63□□□□□ -1.51
GTF3A-208ENST00000493903 BOCQ9BWV1 1114 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 SLC12A9Q9BXP2 914 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 IPPKQ9H8X2 491 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 ANLNQ9NQW6 1124 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 PRDM5Q9NQX1 630 aaPredicted RBP5.63□□□□□ -1.51
GTF3A-208ENST00000493903 CLEC1BQ9P126 229 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 INTUQ9ULD6 942 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 SPO11Q9Y5K1 396 aa5.63□□□□□ -1.51
GTF3A-208ENST00000493903 FRMPD2Q68DX3 1309 aaPredicted RBP5.63□□□□□ -1.51
GTF3A-208ENST00000493903 H7C1D1 291 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 MEIS1O00470 390 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 MYO1BO43795 1136 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 NFICP08651 508 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 LCP1P13796 627 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 IFNGR1P15260 489 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 VAV1P15498 845 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 ENDOUP21128 410 aaKnown RBP5.62□□□□□ -1.51
GTF3A-208ENST00000493903 RXRBP28702 533 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 TPP2P29144 1249 aaPredicted RBP5.62□□□□□ -1.51
GTF3A-208ENST00000493903 GRK3P35626 688 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 NEK3P51956 506 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 GTF2A2P52657 109 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 GJA9P57773 515 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 ODF1Q14990 250 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 CLEC16AQ2KHT3 1053 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 RRP12Q5JTH9 1297 aaKnown RBP5.62□□□□□ -1.51
GTF3A-208ENST00000493903 CYB5RLQ6IPT4 315 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 CHST15Q7LFX5 561 aaPredicted RBP5.62□□□□□ -1.51
GTF3A-208ENST00000493903 MORC1Q86VD1 984 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 CLEC10AQ8IUN9 316 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 FAM43AQ8N2R8 423 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 TOP6BLQ8N6T0 577 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 ENAHQ8N8S7 591 aaPredicted RBP5.62□□□□□ -1.51
GTF3A-208ENST00000493903 ZNF610Q8N9Z0 462 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 FBLIM1Q8WUP2 373 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 FAM83CQ9BQN1 747 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 GPR62Q9BZJ7 368 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms