RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 BRIP1Q9BX63 1249 aa16.31■□□□□ 0.2
PABPC4-216ENST00000492468 TRMT112Q9UI30 125 aaKnown RBP16.31■□□□□ 0.2
PABPC4-216ENST00000492468 DNAJC8O75937 253 aaPredicted RBP16.31■□□□□ 0.2
PABPC4-216ENST00000492468 SLC8A1P32418 973 aa16.31■□□□□ 0.2
PABPC4-216ENST00000492468 CUL1Q13616 776 aa16.31■□□□□ 0.2
PABPC4-216ENST00000492468 CNNM4Q6P4Q7 775 aa16.31■□□□□ 0.2
PABPC4-216ENST00000492468 CABP7Q86V35 215 aa16.31■□□□□ 0.2
PABPC4-216ENST00000492468 CACNA2D3Q8IZS8 1091 aa16.31■□□□□ 0.2
PABPC4-216ENST00000492468 CABLES1Q8TDN4 633 aa16.31■□□□□ 0.2
PABPC4-216ENST00000492468 GHRP10912 638 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 PPP2R2AP63151 447 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 SATB1Q01826 763 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 RUFY4Q6ZNE9 571 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 OR2W6PQ8NHA6 318 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 CCT6BQ92526 530 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 LRRC45Q96CN5 670 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 CNOT8Q9UFF9 292 aaKnown RBP16.3■□□□□ 0.2
PABPC4-216ENST00000492468 CCDC88AQ3V6T2 1871 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 MYH4Q9Y623 1939 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 CCDC194A0A1B0GVG4 234 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 CES2O00748 559 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 ZPR1O75312 459 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 SSBP05455 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
PABPC4-216ENST00000492468 TMOD1P28289 359 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 RAPGEF5Q92565 580 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 GPKOWQ92917 476 aaPredicted RBP eCLIP16.3■□□□□ 0.2
PABPC4-216ENST00000492468 AK8Q96MA6 479 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 SCLT1Q96NL6 688 aa16.3■□□□□ 0.2
PABPC4-216ENST00000492468 ORC4O43929 436 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 NMT2O60551 498 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 SLIT2O94813 1529 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 KLRC1P26715 233 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 DNA2P51530 1060 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 TDRD12Q587J7 1177 aaKnown RBP16.29■□□□□ 0.2
PABPC4-216ENST00000492468 DAGLBQ8NCG7 672 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 SYN2Q92777 582 aaPredicted RBP16.29■□□□□ 0.2
PABPC4-216ENST00000492468 HPS3Q969F9 1004 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 KDM4CQ9H3R0 1056 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 PCDHA6Q9UN73 950 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
PABPC4-216ENST00000492468 PCDHA8Q9Y5H6 950 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 MYH7BA7E2Y1 1941 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 OPLAHO14841 1288 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 TLR2O60603 784 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 RTN2O75298 545 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 CTNNA1P35221 906 aaKnown RBP16.29■□□□□ 0.2
PABPC4-216ENST00000492468 HLTFQ14527 1009 aaKnown RBP eCLIP16.29■□□□□ 0.2
PABPC4-216ENST00000492468 INF2Q27J81 1249 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 CACNA2D4Q7Z3S7 1137 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 KLHL7Q8IXQ5 586 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 TBC1D22AQ8WUA7 517 aa16.29■□□□□ 0.2
PABPC4-216ENST00000492468 LUC7LQ9NQ29 371 aaKnown RBP16.29■□□□□ 0.2
PABPC4-216ENST00000492468 PACSIN2Q9UNF0 486 aaPredicted RBP16.29■□□□□ 0.2
PABPC4-216ENST00000492468 SERPING1P05155 500 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 ERCC3P19447 782 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 TXNRD1Q16881 649 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 NBPF9Q3BBW0 867 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 SLC9C1Q4G0N8 1177 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 LRRC55Q6ZSA7 311 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 HVCN1Q96D96 273 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 NEUROG2Q9H2A3 272 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 ATAD5Q96QE3 1844 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 A0A1B0GUA9 196 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 IBSPP21815 317 aaPredicted RBP16.28■□□□□ 0.2
PABPC4-216ENST00000492468 DRD4P21917 467 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 CLNS1AP54105 237 aaKnown RBP16.28■□□□□ 0.2
PABPC4-216ENST00000492468 EHHADHQ08426 723 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 KCNMA1Q12791 1236 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 E2F5Q15329 346 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 GKAP1Q5VSY0 366 aaPredicted RBP16.28■□□□□ 0.2
PABPC4-216ENST00000492468 STAG2Q8N3U4 1231 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 SCFD2Q8WU76 684 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 NUCKS1Q9H1E3 243 aaKnown RBP16.28■□□□□ 0.2
PABPC4-216ENST00000492468 SLC39A2Q9NP94 309 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 TCP11L1Q9NUJ3 509 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 CEP72Q9P209 647 aa16.28■□□□□ 0.2
PABPC4-216ENST00000492468 FGFR1OPO95684 399 aaKnown RBP16.27■□□□□ 0.2
PABPC4-216ENST00000492468 PAX7P23759 505 aa16.27■□□□□ 0.2
PABPC4-216ENST00000492468 KIF5BP33176 963 aa16.27■□□□□ 0.2
PABPC4-216ENST00000492468 DYNLL1P63167 89 aaKnown RBP16.27■□□□□ 0.2
PABPC4-216ENST00000492468 AMPD3Q01432 767 aa16.27■□□□□ 0.2
PABPC4-216ENST00000492468 MTMR3Q13615 1198 aa16.27■□□□□ 0.2
PABPC4-216ENST00000492468 BACH1O14867 736 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 RNASE9P60153 205 aaKnown RBP16.26■□□□□ 0.19
PABPC4-216ENST00000492468 ELF3P78545 371 aaPredicted RBP16.26■□□□□ 0.19
PABPC4-216ENST00000492468 LRRC63Q05C16 580 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
PABPC4-216ENST00000492468 ATP6V0A2Q9Y487 856 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 KIAA1551Q9HCM1 1747 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 COL1A1P02452 1464 aaPredicted RBP16.26■□□□□ 0.19
PABPC4-216ENST00000492468 F8W031 263 aaPredicted RBP16.26■□□□□ 0.19
PABPC4-216ENST00000492468 PPP1R12AO14974 1030 aaPredicted RBP16.26■□□□□ 0.19
PABPC4-216ENST00000492468 PPIP5K2O43314 1243 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 NOL4O94818 638 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 ATP6V1G2O95670 118 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 STARD3NLO95772 234 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 OR52Z1P0C646 297 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 SLC18A3Q16572 532 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 SFMBT2Q5VUG0 894 aa16.26■□□□□ 0.19
PABPC4-216ENST00000492468 RCSD1Q6JBY9 416 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms