RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 KPNA6O60684 536 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 GGPS1O95749 300 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 UBA1P22314 1058 aaKnown RBP13.58□□□□□ -0.24
MDC1-207ENST00000492462 CCL23P55773 120 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 SEMA3FQ13275 785 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 MYSM1Q5VVJ2 828 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 WWC2Q6AWC2 1192 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 FAM109BQ6ICB4 259 aaPredicted RBP13.58□□□□□ -0.24
MDC1-207ENST00000492462 HEATR3Q7Z4Q2 680 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 DHX37Q8IY37 1157 aaKnown RBP13.58□□□□□ -0.24
MDC1-207ENST00000492462 BRF1Q92994 677 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 EMID1Q96A84 441 aaPredicted RBP13.58□□□□□ -0.24
MDC1-207ENST00000492462 RNPC3Q96LT9 517 aaKnown RBP13.58□□□□□ -0.24
MDC1-207ENST00000492462 NAP1L2Q9ULW6 460 aaPredicted RBP13.58□□□□□ -0.24
MDC1-207ENST00000492462 TELO2Q9Y4R8 837 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 REC8O95072 547 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 HMGB1P09429 215 aaKnown RBP13.57□□□□□ -0.24
MDC1-207ENST00000492462 ZNF286BP0CG31 522 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 RPS6KB1P23443 525 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 LAMC2Q13753 1193 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 CELF3Q5SZQ8 465 aaKnown RBP13.57□□□□□ -0.24
MDC1-207ENST00000492462 BLOC1S2Q6QNY1 142 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 MAFAQ8NHW3 353 aaPredicted RBP13.57□□□□□ -0.24
MDC1-207ENST00000492462 CUL5Q93034 780 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 VWCEQ96DN2 955 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 SEZ6LQ9BYH1 1024 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 PSTPIP2Q9H939 334 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 RBM28Q9NW13 759 aaKnown RBP13.57□□□□□ -0.24
MDC1-207ENST00000492462 V9GY48 417 aaPredicted RBP13.57□□□□□ -0.24
MDC1-207ENST00000492462 CDH23Q9H251 3354 aa13.57□□□□□ -0.24
MDC1-207ENST00000492462 SPATA31C2B4DYI2 1134 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 CASTP20810 708 aaKnown RBP13.56□□□□□ -0.24
MDC1-207ENST00000492462 ADD1P35611 737 aaKnown RBP13.56□□□□□ -0.24
MDC1-207ENST00000492462 FGD1P98174 961 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 PPIGQ13427 754 aaKnown RBP eCLIP13.56□□□□□ -0.242e-8■■■□□ 16.2
MDC1-207ENST00000492462 DGKDQ16760 1214 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 HSDL1Q3SXM5 330 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 NFRKBQ6P4R8 1299 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 ZNF365Q70YC5 407 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 TMEM199Q8N511 208 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 TET1Q8NFU7 2136 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 PPTC7Q8NI37 304 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 SCLYQ96I15 445 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
MDC1-207ENST00000492462 CTAGE1Q96RT6 745 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 USP26Q9BXU7 913 aa13.56□□□□□ -0.24
MDC1-207ENST00000492462 PPFIA3O75145 1194 aa13.55□□□□□ -0.24
MDC1-207ENST00000492462 HOXD8P13378 290 aaPredicted RBP13.55□□□□□ -0.24
MDC1-207ENST00000492462 ICAM3P32942 547 aa13.55□□□□□ -0.24
MDC1-207ENST00000492462 PSEN2P49810 448 aa13.55□□□□□ -0.24
MDC1-207ENST00000492462 PCNX4Q63HM2 1172 aa13.55□□□□□ -0.24
MDC1-207ENST00000492462 GDF6Q6KF10 455 aaPredicted RBP13.55□□□□□ -0.24
MDC1-207ENST00000492462 KCNV1Q6PIU1 500 aa13.55□□□□□ -0.24
MDC1-207ENST00000492462 PGBD1Q96JS3 809 aa13.55□□□□□ -0.24
MDC1-207ENST00000492462 SPATA33Q96N06 139 aa13.55□□□□□ -0.24
MDC1-207ENST00000492462 ALG1Q9BT22 464 aa13.55□□□□□ -0.24
MDC1-207ENST00000492462 AGXT2Q9BYV1 514 aa13.55□□□□□ -0.24
MDC1-207ENST00000492462 IL23AQ9NPF7 189 aa13.55□□□□□ -0.24
MDC1-207ENST00000492462 GRXCR1A8MXD5 290 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 STXBP3O00186 592 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 HAS3O00219 553 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 ADAMTS3O15072 1205 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 F2P00734 622 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 TGFB3P10600 412 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 METAP2P50579 478 aaKnown RBP eCLIP13.54□□□□□ -0.24
MDC1-207ENST00000492462 NAPAP54920 295 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
MDC1-207ENST00000492462 HIC1Q14526 733 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 MFSD10Q14728 455 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 GNPTABQ3T906 1256 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 RASIP1Q5U651 963 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 ERICH6BQ5W0A0 696 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
MDC1-207ENST00000492462 MLXIPQ9HAP2 919 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 TMEM260Q9NX78 707 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 CXXC1Q9P0U4 656 aaPredicted RBP13.54□□□□□ -0.24
MDC1-207ENST00000492462 HDAC6Q9UBN7 1215 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 PCDHA6Q9UN73 950 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 PCDHA8Q9Y5H6 950 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 TANC1Q9C0D5 1861 aa13.54□□□□□ -0.24
MDC1-207ENST00000492462 GBF1Q92538 1859 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 FIBPO43427 364 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 ATP9AO75110 1047 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 PPFIA4O75335 1185 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 STAM2O75886 525 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 SUPT20HL2P0C7V6 817 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 ITGB5P18084 799 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 RCAN1P53805 252 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 SMAD3P84022 425 aaKnown RBP13.53□□□□□ -0.24
MDC1-207ENST00000492462 ZNF200P98182 395 aaPredicted RBP13.53□□□□□ -0.24
MDC1-207ENST00000492462 TOB2Q14106 344 aaPredicted RBP13.53□□□□□ -0.24
MDC1-207ENST00000492462 PTGISQ16647 500 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 KIAA0753Q2KHM9 967 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 CYFIP1Q7L576 1253 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 SESTD1Q86VW0 696 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 FBXL16Q8N461 479 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 DHX38Q92620 1227 aaKnown RBP13.53□□□□□ -0.24
MDC1-207ENST00000492462 C16orf70Q9BSU1 422 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms