RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 NFXL1Q6ZNB6 911 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 RPUSD2Q8IZ73 545 aaKnown RBP12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 JAKMIP1Q96N16 626 aaKnown RBP12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 IWS1Q96ST2 819 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 TM6SF1Q9BZW5 370 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 MSRAQ9UJ68 235 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 SNX14Q9Y5W7 946 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 CYP46A1Q9Y6A2 500 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 MRVI1Q9Y6F6 885 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 TCF20Q9UGU0 1960 aaKnown RBP12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 TRANK1O15050 2925 aa12.74□□□□□ -0.37
TMEM39A-211ENST00000491685 MICAL3Q7RTP6 2002 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 CCDC69A6NI79 296 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 PRC1O43663 620 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 PFKMP08237 780 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 MYCLP12524 364 aaPredicted RBP12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 ATP2A2P16615 1042 aaKnown RBP12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 HOXD11P31277 338 aaPredicted RBP12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 PTPN11Q06124 597 aaPredicted RBP12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 TROAPQ12815 778 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 TRAF1Q13077 416 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 HIC1Q14526 733 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 PGM5Q15124 567 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 PTGISQ16647 500 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 TCTN1Q2MV58 587 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 SPRED2Q7Z698 418 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 CATIPQ7Z7H3 387 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 MB21D2Q8IYB1 491 aaPredicted RBP12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 PIBF1Q8WXW3 757 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 WNT8BQ93098 351 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 MYL10Q9BUA6 226 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 RIOX1Q9H6W3 641 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 PCDHA1Q9Y5I3 950 aa12.73□□□□□ -0.37
TMEM39A-211ENST00000491685 XIRP2A4UGR9 3374 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 EIF3JO75822 258 aaKnown RBP12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 F2P00734 622 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 CA3P07451 260 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 CALM1P0DP23 149 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 CALM2P0DP24 149 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 CALM3P0DP25 149 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 LIFRP42702 1097 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 PSEN2P49810 448 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 MRPS5P82675 430 aaKnown RBP12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 SP2Q02086 613 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 MFSD10Q14728 455 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 CCDC85BQ15834 202 aaPredicted RBP12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 PPP2R2DQ66LE6 453 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 TMCO2Q7Z6W1 182 aaPredicted RBP12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 SESTD1Q86VW0 696 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 EMID1Q96A84 441 aaPredicted RBP12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 UHRF1Q96T88 793 aaPredicted RBP12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 ALG1Q9BT22 464 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 C22orf23Q9BZE7 217 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 BCAS3Q9H6U6 928 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 SLC28A3Q9HAS3 691 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 HDAC6Q9UBN7 1215 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 GTF2IRD1Q9UHL9 959 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 NOD1Q9Y239 953 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 PCDHA11Q9Y5I1 949 aa12.72□□□□□ -0.37
TMEM39A-211ENST00000491685 EPOPA6NHQ4 379 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 HAS3O00219 553 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 RFXAPO00287 272 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 HOXD8P13378 290 aaPredicted RBP12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 CASTP20810 708 aaKnown RBP12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 UBA1P22314 1058 aaKnown RBP12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 IGFBP4P22692 258 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 RFC2P35250 354 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 ZNF200P98182 395 aaPredicted RBP12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 BFSP2Q13515 415 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 DGKDQ16760 1214 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 HSDL1Q3SXM5 330 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 RUFY3Q7L099 469 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 FCHSD1Q86WN1 690 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 RETREG2Q8NC44 543 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 PPTC7Q8NI37 304 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 IGDCC4Q8TDY8 1250 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 CERS4Q9HA82 394 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 LY9Q9HBG7 655 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 TELO2Q9Y4R8 837 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 SLC12A7Q9Y666 1083 aa12.71□□□□□ -0.37
TMEM39A-211ENST00000491685 FRMPD4Q14CM0 1322 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 NBNO60934 754 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 SEC24BO95487 1268 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 GGPS1O95749 300 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 GNAQP50148 359 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 EXOSC10Q01780 885 aaKnown RBP12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 SEMA3FQ13275 785 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 KIAA0753Q2KHM9 967 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 TRIM71Q2Q1W2 868 aaKnown RBP12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 ADCK5Q3MIX3 580 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 CELF3Q5SZQ8 465 aaKnown RBP12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 MYSM1Q5VVJ2 828 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 LRRC8DQ7L1W4 858 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 VSIG10LQ86VR7 867 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms