RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LGR5O75473 907 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 SP2Q02086 613 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 DIEXFQ68CQ4 756 aaKnown RBP15.48■□□□□ 0.07
USF1-206ENST00000491629 PTCRAQ6ISU1 281 aaPredicted RBP15.48■□□□□ 0.07
USF1-206ENST00000491629 MFSD6Q6ZSS7 791 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 ALYREFQ86V81 257 aaKnown RBP15.48■□□□□ 0.07
USF1-206ENST00000491629 FBXO22Q8NEZ5 403 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 DBF4BQ8NFT6 615 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 PPTC7Q8NI37 304 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 BCAS3Q9H6U6 928 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 PXMP2Q9NR77 195 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 COL4A6Q14031 1691 aa15.48■□□□□ 0.07
USF1-206ENST00000491629 SORBS3O60504 671 aa15.47■□□□□ 0.07
USF1-206ENST00000491629 NR3C2P08235 984 aa15.47■□□□□ 0.07
USF1-206ENST00000491629 HSDL1Q3SXM5 330 aa15.47■□□□□ 0.07
USF1-206ENST00000491629 MYSM1Q5VVJ2 828 aa15.47■□□□□ 0.07
USF1-206ENST00000491629 SERINC5Q86VE9 423 aa15.47■□□□□ 0.07
USF1-206ENST00000491629 DGKHQ86XP1 1220 aa15.47■□□□□ 0.07
USF1-206ENST00000491629 PNMA1Q8ND90 353 aa15.47■□□□□ 0.07
USF1-206ENST00000491629 GPKOWQ92917 476 aaPredicted RBP eCLIP15.47■□□□□ 0.07
USF1-206ENST00000491629 MAF1Q9H063 256 aa15.47■□□□□ 0.07
USF1-206ENST00000491629 JMJD4Q9H9V9 463 aa15.47■□□□□ 0.07
USF1-206ENST00000491629 INSL6Q9Y581 213 aa15.47■□□□□ 0.07
USF1-206ENST00000491629 CCDC171Q6TFL3 1326 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 H3BQ06 376 aaPredicted RBP15.46■□□□□ 0.07
USF1-206ENST00000491629 PPP1R11O60927 126 aaPredicted RBP15.46■□□□□ 0.07
USF1-206ENST00000491629 EFCAB14O75071 495 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 EIF3JO75822 258 aaKnown RBP15.46■□□□□ 0.07
USF1-206ENST00000491629 HOXC8P31273 242 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 HSD17B4P51659 736 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 LAMC2Q13753 1193 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 COL19A1Q14993 1142 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 EPC2Q52LR7 807 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 PLEKHG4Q58EX7 1191 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 IL31RAQ8NI17 732 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 ANKS1AQ92625 1134 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 MRPL38Q96DV4 380 aaKnown RBP15.46■□□□□ 0.07
USF1-206ENST00000491629 C16orf70Q9BSU1 422 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 MRVI1Q9Y6F6 885 aa15.46■□□□□ 0.07
USF1-206ENST00000491629 TTC3P53804 2025 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.45■□□□□ 0.06
USF1-206ENST00000491629 POTEB3A0JP26 581 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 GHRHRQ02643 423 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 ANKRD45Q5TZF3 282 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 ARHGEF16Q5VV41 709 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 POTEBQ6S5H4 581 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 FBXO11Q86XK2 927 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 DHX37Q8IY37 1157 aaKnown RBP15.45■□□□□ 0.06
USF1-206ENST00000491629 MYOCDQ8IZQ8 938 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 STAG2Q8N3U4 1231 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 ENAHQ8N8S7 591 aaPredicted RBP15.45■□□□□ 0.06
USF1-206ENST00000491629 ZFP91Q96JP5 570 aaPredicted RBP15.45■□□□□ 0.06
USF1-206ENST00000491629 PDCD2LQ9BRP1 358 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 KATNAL1Q9BW62 490 aa15.45■□□□□ 0.06
USF1-206ENST00000491629 RSPH10B2B2RC85 870 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 H3BNC9 293 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 KDM4AO75164 1064 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 PPFIA4O75335 1185 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 CFBP00751 764 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 RSPH10BP0C881 870 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 PCP11498 1178 aaKnown RBP15.44■□□□□ 0.06
USF1-206ENST00000491629 SSTR3P32745 418 aaPredicted RBP15.44■□□□□ 0.06
USF1-206ENST00000491629 THPOP40225 353 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 SLC35G1Q2M3R5 365 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 TCEAL5Q5H9L2 206 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 CELF3Q5SZQ8 465 aaKnown RBP15.44■□□□□ 0.06
USF1-206ENST00000491629 MCF2L2Q86YR7 1114 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 ESR2Q92731 530 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 TOP1MTQ969P6 601 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 VAT1LQ9HCJ6 419 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 MRPL11Q9Y3B7 192 aaKnown RBP15.44■□□□□ 0.06
USF1-206ENST00000491629 TELO2Q9Y4R8 837 aa15.44■□□□□ 0.06
USF1-206ENST00000491629 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 B4E1Z4 1266 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 TREHO43280 583 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 GGPS1O95749 300 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 LINC00271P0C7V0 271 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 UBA1P22314 1058 aaKnown RBP15.43■□□□□ 0.06
USF1-206ENST00000491629 LTBRP36941 435 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 ZP2Q05996 745 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 ASPRV1Q53RT3 343 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 STOX1Q6ZVD7 989 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 VSIG10LQ86VR7 867 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 MTMR8Q96EF0 704 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 CRBNQ96SW2 442 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 EMSYQ7Z589 1322 aa15.43■□□□□ 0.06
USF1-206ENST00000491629 AMHP03971 560 aa15.42■□□□□ 0.06
USF1-206ENST00000491629 MYCLP12524 364 aaPredicted RBP15.42■□□□□ 0.06
USF1-206ENST00000491629 HOXA13P31271 388 aaPredicted RBP15.42■□□□□ 0.06
USF1-206ENST00000491629 GPM6BQ13491 265 aa15.42■□□□□ 0.06
USF1-206ENST00000491629 PGM5Q15124 567 aa15.42■□□□□ 0.06
USF1-206ENST00000491629 TMEM192Q8IY95 271 aa15.42■□□□□ 0.06
USF1-206ENST00000491629 BANK1Q8NDB2 785 aa15.42■□□□□ 0.06
USF1-206ENST00000491629 PABPC5Q96DU9 382 aaKnown RBP15.42■□□□□ 0.06
USF1-206ENST00000491629 SPATA33Q96N06 139 aa15.42■□□□□ 0.06
USF1-206ENST00000491629 ZSCAN10Q96SZ4 725 aaPredicted RBP15.42■□□□□ 0.06
USF1-206ENST00000491629 RNPEPQ9H4A4 650 aa15.42■□□□□ 0.06
USF1-206ENST00000491629 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
USF1-206ENST00000491629 KAT14Q9H8E8 782 aa15.42■□□□□ 0.06
USF1-206ENST00000491629 ZSWIM5Q9P217 1185 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms