RNA–Protein interactions for RNA: ENST00000491439.1

SNAP47-211, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 734 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-211ENST00000491439 TGFB3P10600 412 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 CCND2P30279 289 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 HOXC8P31273 242 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 PTK7Q13308 1070 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 COL9A3Q14050 684 aaPredicted RBP11.66□□□□□ -0.54
SNAP47-211ENST00000491439 HIC1Q14526 733 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 KIAA0753Q2KHM9 967 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 CATIPQ7Z7H3 387 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 HERC6Q8IVU3 1022 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 C7orf31Q8N865 590 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 WNT8BQ93098 351 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 INPP4AQ96PE3 977 aaPredicted RBP11.66□□□□□ -0.54
SNAP47-211ENST00000491439 C16orf70Q9BSU1 422 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 MTA3Q9BTC8 594 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 SPZ1Q9BXG8 430 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 FTOQ9C0B1 505 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNAP47-211ENST00000491439 LSG1Q9H089 658 aaKnown RBP11.66□□□□□ -0.54
SNAP47-211ENST00000491439 NBNO60934 754 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 DDAH1O94760 285 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 PARNO95453 639 aaKnown RBP11.65□□□□□ -0.54
SNAP47-211ENST00000491439 CKBP12277 381 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 POU3F3P20264 500 aaPredicted RBP11.65□□□□□ -0.54
SNAP47-211ENST00000491439 IGFBP4P22692 258 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 ICAM3P32942 547 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 WDR5P61964 334 aaKnown RBP11.65□□□□□ -0.54
SNAP47-211ENST00000491439 MRPS9P82933 396 aaKnown RBP11.65□□□□□ -0.54
SNAP47-211ENST00000491439 SEMA3FQ13275 785 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 MBTPS1Q14703 1052 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 TCTN1Q2MV58 587 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 FCHSD1Q86WN1 690 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 ZNF654Q8IZM8 581 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 ATXN2LQ8WWM7 1075 aaKnown RBP11.65□□□□□ -0.54
SNAP47-211ENST00000491439 PPM1EQ8WY54 764 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 SYMPKQ92797 1274 aaKnown RBP11.65□□□□□ -0.54
SNAP47-211ENST00000491439 ZFP91Q96JP5 570 aaPredicted RBP11.65□□□□□ -0.54
SNAP47-211ENST00000491439 SPATA33Q96N06 139 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 ALG1Q9BT22 464 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 BCAS3Q9H6U6 928 aa11.65□□□□□ -0.54
SNAP47-211ENST00000491439 EPOPA6NHQ4 379 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 SPATA31C2B4DYI2 1134 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 PIK3CDO00329 1044 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 SH2B2O14492 632 aaPredicted RBP11.64□□□□□ -0.55
SNAP47-211ENST00000491439 PRC1O43663 620 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 SORBS3O60504 671 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 STAM2O75886 525 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 SMARCA1P28370 1054 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 ZNF200P98182 395 aaPredicted RBP11.64□□□□□ -0.55
SNAP47-211ENST00000491439 TAP1Q03518 808 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 CCDC85BQ15834 202 aaPredicted RBP11.64□□□□□ -0.55
SNAP47-211ENST00000491439 CNKSR3Q6P9H4 555 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 SERINC5Q86VE9 423 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 MYL10Q9BUA6 226 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 THEGQ9P2T0 379 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 XIRP2A4UGR9 3374 aa11.64□□□□□ -0.55
SNAP47-211ENST00000491439 RBAK-RBAKDNI3L0D1 243 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 MEIS2O14770 477 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 SLC27A2O14975 620 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 PLEKHA8P1O95397 391 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 KIF5BP33176 963 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 DEFB103AP81534 67 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 MKRN4PQ13434 485 aaPredicted RBP11.63□□□□□ -0.55
SNAP47-211ENST00000491439 GNPTABQ3T906 1256 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 ZNF618Q5T7W0 954 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
SNAP47-211ENST00000491439 CTCFLQ8NI51 663 aaPredicted RBP11.63□□□□□ -0.55
SNAP47-211ENST00000491439 PIBF1Q8WXW3 757 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 RRP36Q96EU6 259 aaKnown RBP11.63□□□□□ -0.55
SNAP47-211ENST00000491439 ASB2Q96Q27 587 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 LZTS2Q9BRK4 669 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 ESYT1Q9BSJ8 1104 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 MTCH2Q9Y6C9 303 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 REV3LO60673 3130 aa11.63□□□□□ -0.55
SNAP47-211ENST00000491439 KIAA1217Q5T5P2 1943 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 SCN5AQ14524 2016 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 LCHNA4D1U4 455 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 RFXAPO00287 272 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 FIBPO43427 364 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 LGALS2P05162 132 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 MCM5P33992 734 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 LIFRP42702 1097 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 KCNJ6P48051 423 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 NECTIN1Q15223 517 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 PCNX4Q63HM2 1172 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 XRRA1Q6P2D8 792 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 USP17L6PQ6QN14 398 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 CASC1Q6TDU7 716 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 METTL7BQ6UX53 244 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 SPRED2Q7Z698 418 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 TMCO2Q7Z6W1 182 aaPredicted RBP11.62□□□□□ -0.55
SNAP47-211ENST00000491439 TMEM87BQ96K49 555 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 GPR20Q99678 358 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 CERS4Q9HA82 394 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 MLXIPQ9HAP2 919 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 TELO2Q9Y4R8 837 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
SNAP47-211ENST00000491439 GBF1Q92538 1859 aa11.61□□□□□ -0.55
SNAP47-211ENST00000491439 ABHD14A-ACY1A0A1B0GW23 586 aa11.61□□□□□ -0.55
SNAP47-211ENST00000491439 C17orf102A2RUQ5 167 aa11.61□□□□□ -0.55
SNAP47-211ENST00000491439 KIF28PB7ZC32 967 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms