RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 BRAPQ7Z569 592 aa12.23□□□□□ -0.45
CACNA1C-227ENST00000491104 NLRX1Q86UT6 975 aa12.23□□□□□ -0.45
CACNA1C-227ENST00000491104 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
CACNA1C-227ENST00000491104 LENG9Q96B70 501 aa12.23□□□□□ -0.45
CACNA1C-227ENST00000491104 UNC93B1Q9H1C4 597 aa12.23□□□□□ -0.45
CACNA1C-227ENST00000491104 BCAS3Q9H6U6 928 aa12.23□□□□□ -0.45
CACNA1C-227ENST00000491104 DDX25Q9UHL0 483 aaKnown RBP12.23□□□□□ -0.45
CACNA1C-227ENST00000491104 PCDHB6Q9Y5E3 794 aa12.23□□□□□ -0.45
CACNA1C-227ENST00000491104 MRVI1Q9Y6F6 885 aa12.23□□□□□ -0.45
CACNA1C-227ENST00000491104 TCHHQ07283 1943 aa12.22□□□□□ -0.45
CACNA1C-227ENST00000491104 RBM47A0AV96 593 aaKnown RBP12.22□□□□□ -0.45
CACNA1C-227ENST00000491104 ATP9AO75110 1047 aa12.22□□□□□ -0.45
CACNA1C-227ENST00000491104 SMPD1P17405 629 aa12.22□□□□□ -0.45
CACNA1C-227ENST00000491104 MTMR1Q13613 665 aa12.22□□□□□ -0.45
CACNA1C-227ENST00000491104 GNPTABQ3T906 1256 aa12.22□□□□□ -0.45
CACNA1C-227ENST00000491104 GPRASP2Q96D09 838 aa12.22□□□□□ -0.45
CACNA1C-227ENST00000491104 MBOAT7Q96N66 472 aa12.22□□□□□ -0.45
CACNA1C-227ENST00000491104 TMEM60Q9H2L4 133 aa12.22□□□□□ -0.45
CACNA1C-227ENST00000491104 KCNH7Q9NS40 1196 aa12.22□□□□□ -0.45
CACNA1C-227ENST00000491104 CYP3A7-CYP3A51PA0A087WV96 503 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 SPATA31C2B4DYI2 1134 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 DDX39AO00148 427 aaKnown RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 MEIS1O00470 390 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 MSH4O15457 936 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 FIBPO43427 364 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 STAM2O75886 525 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 TXNP10599 105 aaKnown RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 AKR1A1P14550 325 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 UBA1P22314 1058 aaKnown RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 CYP3A7P24462 503 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 ICAM3P32942 547 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 IRX5P78411 483 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 SETQ01105 290 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 SP2Q02086 613 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 CEBPZQ03701 1054 aaKnown RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 TTLL4Q14679 1199 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 Q4G0T1 1027 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 COL13A1Q5TAT6 717 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 CCDC62Q6P9F0 684 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 MOXD1Q6UVY6 613 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 SCFD2Q8WU76 684 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 ZNF333Q96JL9 665 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 ZSCAN16Q9H4T2 348 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 AGO4Q9HCK5 861 aaKnown RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 HMX1Q9NP08 348 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 NRBP1Q9UHY1 535 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 DDX41Q9UJV9 622 aaKnown RBP12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 TELO2Q9Y4R8 837 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 CLIC4Q9Y696 253 aa12.21□□□□□ -0.45
CACNA1C-227ENST00000491104 SEPT4O43236 478 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 NEMFO60524 1076 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 CCL5P13501 91 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 GCFC2P16383 781 aaKnown RBP12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 KCNA2P16389 499 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 TRAPPC10P48553 1259 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 NUCB2P80303 420 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 SP4Q02446 784 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 TNFAIP2Q03169 654 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 ITGB3BPQ13352 177 aaPredicted RBP12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 RILPL1Q5EBL4 403 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 IQSEC1Q6DN90 963 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 PPP4R3AQ6IN85 833 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 NIPA1Q7RTP0 329 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 ARMC5Q96C12 935 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 USP28Q96RU2 1077 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 NAP1L4Q99733 375 aaKnown RBP12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 ZNF577Q9BSK1 485 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 FAM184BQ9ULE4 1060 aa12.2□□□□□ -0.46
CACNA1C-227ENST00000491104 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 MYADML2A6NDP7 307 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 GGPS1O95749 300 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 PDIA4P13667 645 aaKnown RBP12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 SF3A1Q15459 793 aaKnown RBP12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 CALCRLQ16602 461 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 DUSP28Q4G0W2 176 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 CYFIP1Q7L576 1253 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 TLK2Q86UE8 772 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 OR6J1Q8NGC5 347 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 ETNPPLQ8TBG4 499 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 HAS1Q92839 578 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 RNF208Q9H0X6 261 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 KCNMB3Q9NPA1 279 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 CHMP5Q9NZZ3 219 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 DDX20Q9UHI6 824 aaKnown RBP12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 GNEQ9Y223 722 aaKnown RBP12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 WDR81Q562E7 1941 aa12.19□□□□□ -0.46
CACNA1C-227ENST00000491104 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 DHX15O43143 795 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 DYNC1LI2O43237 492 aaPredicted RBP12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 MARCH6O60337 910 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 FARP2O94887 1054 aaPredicted RBP12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 PGK1P00558 417 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 GH1P01241 217 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 OR52Z1P0C646 297 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 TXKP42681 527 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 DNM1Q05193 864 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms