RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 LLPHQ9BRT6 129 aaKnown RBP8.75□□□□□ -1.01
CLDN1-202ENST00000490800 UBAC1Q9BSL1 405 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 NCOA5Q9HCD5 579 aaKnown RBP8.75□□□□□ -1.01
CLDN1-202ENST00000490800 HOMER2Q9NSB8 354 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 EVA1BQ9NVM1 165 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 PRKAG2Q9UGJ0 569 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 FBXO40Q9UH90 709 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 FAM184BQ9ULE4 1060 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 NAP1L2Q9ULW6 460 aaPredicted RBP8.75□□□□□ -1.01
CLDN1-202ENST00000490800 PHF24Q9UPV7 400 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 SMC3Q9UQE7 1217 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 MTMR7Q9Y216 660 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 TNKSO95271 1327 aa8.75□□□□□ -1.01
CLDN1-202ENST00000490800 PLIN4Q96Q06 1357 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 ERICH2A1L162 156 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 CCDC69A6NI79 296 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 ZBTB43O43298 467 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 JAK2O60674 1132 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 FBXO45P0C2W1 286 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 GJB2P29033 226 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 CNTN2Q02246 1040 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 TLE2Q04725 743 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 ACVR2BQ13705 512 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 PKP1Q13835 747 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 SNX17Q15036 470 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 CCDC174Q6PII3 467 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 RASGRP2Q7LDG7 609 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 SH3RF1Q7Z6J0 888 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 FAM160B2Q86V87 743 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 IQCA1Q86XH1 822 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 TMTC2Q8N394 836 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 NSUN7Q8NE18 718 aaKnown RBP8.74□□□□□ -1.01
CLDN1-202ENST00000490800 SMARCC2Q8TAQ2 1214 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 ANKS1AQ92625 1134 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 FGD4Q96M96 766 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 PRDM5Q9NQX1 630 aaPredicted RBP8.74□□□□□ -1.01
CLDN1-202ENST00000490800 TCP11L1Q9NUJ3 509 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 ZHX1Q9UKY1 873 aaPredicted RBP8.74□□□□□ -1.01
CLDN1-202ENST00000490800 PRR12Q9ULL5 1215 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 ZDHHC9Q9Y397 364 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 ZNF236Q9UL36 1845 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 ZNF536O15090 1300 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 SYNGAP1Q96PV0 1343 aa8.74□□□□□ -1.01
CLDN1-202ENST00000490800 GREB1LQ9C091 1923 aaPredicted RBP8.74□□□□□ -1.01
CLDN1-202ENST00000490800 NID2Q14112 1375 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 COL11A1P12107 1806 aaPredicted RBP8.73□□□□□ -1.01
CLDN1-202ENST00000490800 TRIM43BA6NCK2 446 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 PLA2G6O60733 806 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 ADAMTS4O75173 837 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 ALAS1P13196 640 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 RXRAP19793 462 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 NOVP48745 357 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 METAP2P50579 478 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLDN1-202ENST00000490800 RCAN1P53805 252 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 NUCB2P80303 420 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 NR1H3Q13133 447 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 KCNA10Q16322 511 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 CCDC144BQ3MJ40 725 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 IFIT1BQ5T764 474 aaKnown RBP8.73□□□□□ -1.01
CLDN1-202ENST00000490800 C1orf53Q5VUE5 145 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 TTBK2Q6IQ55 1244 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 Q7L0L9 218 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 ARMCX2Q7L311 632 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 MICU3Q86XE3 530 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 CCDC144CPQ8IYA2 1237 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 ZNF654Q8IZM8 581 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 DEFB123Q8N688 67 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 KLHDC9Q8NEP7 349 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 BADQ92934 168 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 TRIM43Q96BQ3 446 aaPredicted RBP8.73□□□□□ -1.01
CLDN1-202ENST00000490800 TRERF1Q96PN7 1200 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 TMEM47Q9BQJ4 181 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 MYL10Q9BUA6 226 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 ABHD16BQ9H3Z7 469 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 ACAD9Q9H845 621 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 RNF146Q9NTX7 359 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 FCF1Q9Y324 198 aaKnown RBP8.73□□□□□ -1.01
CLDN1-202ENST00000490800 SLC12A7Q9Y666 1083 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 ZNFX1Q9P2E3 1918 aaKnown RBP8.73□□□□□ -1.01
CLDN1-202ENST00000490800 PARP14Q460N5 1801 aa8.73□□□□□ -1.01
CLDN1-202ENST00000490800 SMCHD1A6NHR9 2005 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 A0A1W2PQ45 241 aaPredicted RBP8.72□□□□□ -1.01
CLDN1-202ENST00000490800 A0A1W2PQY0 241 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 PTPDC1A2A3K4 754 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 MYADML2A6NDP7 307 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 GOLGA8AA7E2F4 631 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 ZBBXA8MT70 800 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 ADCY6O43306 1168 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 DUSP11O75319 330 aaKnown RBP8.72□□□□□ -1.01
CLDN1-202ENST00000490800 BRD1O95696 1058 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 ITGB8P26012 769 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 CDC27P30260 824 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 ADD1P35611 737 aaKnown RBP8.72□□□□□ -1.01
CLDN1-202ENST00000490800 SLC16A2P36021 539 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 ACLYP53396 1101 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 SHHQ15465 462 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 TKFCQ3LXA3 575 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 CCDC178Q5BJE1 867 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 MUM1L1Q5H9M0 696 aa8.72□□□□□ -1.01
CLDN1-202ENST00000490800 CCSAPQ6IQ19 270 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms