RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 RTEL1Q9NZ71 1219 aa36.1■■■■□ 3.37
LDB1-204ENST00000490751 NOD1Q9Y239 953 aa36.1■■■■□ 3.37
LDB1-204ENST00000490751 GOLGA8AA7E2F4 631 aa36.09■■■■□ 3.37
LDB1-204ENST00000490751 GOLGA8BA8MQT2 603 aa36.09■■■■□ 3.37
LDB1-204ENST00000490751 HOXD8P13378 290 aaPredicted RBP36.09■■■■□ 3.37
LDB1-204ENST00000490751 PSEN2P49810 448 aa36.09■■■■□ 3.37
LDB1-204ENST00000490751 FGD1P98174 961 aa36.09■■■■□ 3.37
LDB1-204ENST00000490751 SESTD1Q86VW0 696 aa36.09■■■■□ 3.37
LDB1-204ENST00000490751 KATNAL1Q9BW62 490 aa36.09■■■■□ 3.37
LDB1-204ENST00000490751 TANC1Q9C0D5 1861 aa36.09■■■■□ 3.37
LDB1-204ENST00000490751 DOCK5Q9H7D0 1870 aa36.08■■■■□ 3.37
LDB1-204ENST00000490751 F2P00734 622 aa36.08■■■■□ 3.37
LDB1-204ENST00000490751 ICAM3P32942 547 aa36.08■■■■□ 3.37
LDB1-204ENST00000490751 PCNX4Q63HM2 1172 aa36.08■■■■□ 3.37
LDB1-204ENST00000490751 GUCD1Q96NT3 240 aa36.08■■■■□ 3.37
LDB1-204ENST00000490751 MLXIPQ9HAP2 919 aa36.08■■■■□ 3.37
LDB1-204ENST00000490751 STXBP5LQ9Y2K9 1186 aa36.08■■■■□ 3.37
LDB1-204ENST00000490751 SCN5AQ14524 2016 aa36.08■■■■□ 3.37
LDB1-204ENST00000490751 FGBP02675 491 aa36.07■■■■□ 3.36
LDB1-204ENST00000490751 PTGISQ16647 500 aa36.07■■■■□ 3.36
LDB1-204ENST00000490751 UBE2SQ16763 222 aa36.07■■■■□ 3.36
LDB1-204ENST00000490751 GDF6Q6KF10 455 aaPredicted RBP36.07■■■■□ 3.36
LDB1-204ENST00000490751 HERVK_113Q902F9 699 aa36.07■■■■□ 3.36
LDB1-204ENST00000490751 ALG1Q9BT22 464 aa36.07■■■■□ 3.36
LDB1-204ENST00000490751 NAP1L2Q9ULW6 460 aaPredicted RBP36.07■■■■□ 3.36
LDB1-204ENST00000490751 FIBPO43427 364 aa36.06■■■■□ 3.36
LDB1-204ENST00000490751 PPFIA4O75335 1185 aa36.06■■■■□ 3.36
LDB1-204ENST00000490751 FUT2Q10981 343 aa36.06■■■■□ 3.36
LDB1-204ENST00000490751 SEMA3FQ13275 785 aa36.06■■■■□ 3.36
LDB1-204ENST00000490751 MFSD10Q14728 455 aa36.06■■■■□ 3.36
LDB1-204ENST00000490751 XRRA1Q6P2D8 792 aa36.06■■■■□ 3.36
LDB1-204ENST00000490751 BLOC1S2Q6QNY1 142 aa36.06■■■■□ 3.36
LDB1-204ENST00000490751 RPUSD2Q8IZ73 545 aaKnown RBP36.06■■■■□ 3.36
LDB1-204ENST00000490751 SPATA31C2B4DYI2 1134 aa36.05■■■■□ 3.36
LDB1-204ENST00000490751 HAS3O00219 553 aa36.05■■■■□ 3.36
LDB1-204ENST00000490751 RCAN1P53805 252 aa36.05■■■■□ 3.36
LDB1-204ENST00000490751 KIAA0753Q2KHM9 967 aa36.05■■■■□ 3.36
LDB1-204ENST00000490751 WWC2Q6AWC2 1192 aa36.05■■■■□ 3.36
LDB1-204ENST00000490751 Q6ZUG5 572 aa36.05■■■■□ 3.36
LDB1-204ENST00000490751 C7orf31Q8N865 590 aa36.05■■■■□ 3.36
LDB1-204ENST00000490751 MTIF3Q9H2K0 278 aaKnown RBP36.05■■■■□ 3.36
LDB1-204ENST00000490751 SEMA6BQ9H3T3 888 aa36.05■■■■□ 3.36
LDB1-204ENST00000490751 BCAS3Q9H6U6 928 aa36.05■■■■□ 3.36
LDB1-204ENST00000490751 HDAC6Q9UBN7 1215 aa36.05■■■■□ 3.36
LDB1-204ENST00000490751 PITPNM1O00562 1244 aa36.04■■■■□ 3.36
LDB1-204ENST00000490751 OTOP2Q7RTS6 562 aa36.04■■■■□ 3.36
LDB1-204ENST00000490751 VWCEQ96DN2 955 aa36.04■■■■□ 3.36
LDB1-204ENST00000490751 TTYH1Q9H313 450 aaPredicted RBP36.04■■■■□ 3.36
LDB1-204ENST00000490751 FAM217BQ9NTX9 383 aaPredicted RBP36.04■■■■□ 3.36
LDB1-204ENST00000490751 CXXC1Q9P0U4 656 aaPredicted RBP36.04■■■■□ 3.36
LDB1-204ENST00000490751 GTF2IRD1Q9UHL9 959 aa36.04■■■■□ 3.36
LDB1-204ENST00000490751 DNAJB2P25686 324 aa36.03■■■■□ 3.36
LDB1-204ENST00000490751 CDC27P30260 824 aa36.03■■■■□ 3.36
LDB1-204ENST00000490751 APOBRQ0VD83 1088 aa36.03■■■■□ 3.36
LDB1-204ENST00000490751 BFSP2Q13515 415 aa36.03■■■■□ 3.36
LDB1-204ENST00000490751 NEDD9Q14511 834 aa36.03■■■■□ 3.36
LDB1-204ENST00000490751 RETREG2Q8NC44 543 aa36.03■■■■□ 3.36
LDB1-204ENST00000490751 CTAGE1Q96RT6 745 aa36.03■■■■□ 3.36
LDB1-204ENST00000490751 V9GY48 417 aaPredicted RBP36.03■■■■□ 3.36
LDB1-204ENST00000490751 TRIP12Q14669 1992 aaPredicted RBP36.02■■■■□ 3.36
LDB1-204ENST00000490751 SPDYE3A6NKU9 549 aa36.02■■■■□ 3.36
LDB1-204ENST00000490751 GRXCR1A8MXD5 290 aa36.02■■■■□ 3.36
LDB1-204ENST00000490751 DEFB128Q7Z7B8 93 aa36.02■■■■□ 3.36
LDB1-204ENST00000490751 BRF1Q92994 677 aa36.02■■■■□ 3.36
LDB1-204ENST00000490751 PPP4R2Q9NY27 417 aa36.02■■■■□ 3.36
LDB1-204ENST00000490751 COL6A3P12111 3177 aa36.01■■■■□ 3.36
LDB1-204ENST00000490751 TMEM265A0A087WTH1 108 aa36.01■■■■□ 3.36
LDB1-204ENST00000490751 RPS6KB1P23443 525 aa36.01■■■■□ 3.36
LDB1-204ENST00000490751 METAP2P50579 478 aaKnown RBP eCLIP36.01■■■■□ 3.36
LDB1-204ENST00000490751 NAPAP54920 295 aa36.01■■■■□ 3.36
LDB1-204ENST00000490751 TYW1BQ6NUM6 668 aa36.01■■■■□ 3.36
LDB1-204ENST00000490751 METTL7BQ6UX53 244 aa36.01■■■■□ 3.36
LDB1-204ENST00000490751 CYFIP1Q7L576 1253 aa36.01■■■■□ 3.36
LDB1-204ENST00000490751 NLRX1Q86UT6 975 aa36.01■■■■□ 3.36
LDB1-204ENST00000490751 C16orf70Q9BSU1 422 aa36.01■■■■□ 3.36
LDB1-204ENST00000490751 NOP56O00567 594 aaKnown RBP36■■■■□ 3.35
LDB1-204ENST00000490751 PFKMP08237 780 aa36■■■■□ 3.35
LDB1-204ENST00000490751 IQCF3P0C7M6 154 aa36■■■■□ 3.35
LDB1-204ENST00000490751 PPP1R18Q6NYC8 613 aa36■■■■□ 3.35
LDB1-204ENST00000490751 CCDC155Q8N6L0 562 aa36■■■■□ 3.35
LDB1-204ENST00000490751 PCDHA6Q9UN73 950 aa36■■■■□ 3.35
LDB1-204ENST00000490751 PCDHA8Q9Y5H6 950 aa36■■■■□ 3.35
LDB1-204ENST00000490751 PSMA5P28066 241 aa35.99■■■■□ 3.35
LDB1-204ENST00000490751 RFC2P35250 354 aa35.99■■■■□ 3.35
LDB1-204ENST00000490751 CAGE1Q8TC20 777 aa35.99■■■■□ 3.35
LDB1-204ENST00000490751 ADD1P35611 737 aaKnown RBP35.98■■■■□ 3.35
LDB1-204ENST00000490751 DHX38Q92620 1227 aaKnown RBP35.98■■■■□ 3.35
LDB1-204ENST00000490751 GPRASP2Q96D09 838 aa35.98■■■■□ 3.35
LDB1-204ENST00000490751 CDX2Q99626 313 aaPredicted RBP35.98■■■■□ 3.35
LDB1-204ENST00000490751 PBX4Q9BYU1 374 aa35.98■■■■□ 3.35
LDB1-204ENST00000490751 GBF1Q92538 1859 aa35.98■■■■□ 3.35
LDB1-204ENST00000490751 hCG_1984214I3L0E3 225 aa35.97■■■■□ 3.35
LDB1-204ENST00000490751 STXBP3O00186 592 aa35.97■■■■□ 3.35
LDB1-204ENST00000490751 EPB41L2O43491 1005 aaKnown RBP35.97■■■■□ 3.35
LDB1-204ENST00000490751 LGALS2P05162 132 aa35.97■■■■□ 3.35
LDB1-204ENST00000490751 PBX2P40425 430 aa35.97■■■■□ 3.35
LDB1-204ENST00000490751 ZNF713Q8N859 430 aaPredicted RBP35.97■■■■□ 3.35
LDB1-204ENST00000490751 TIFAQ96CG3 184 aa35.97■■■■□ 3.35
LDB1-204ENST00000490751 SENP7Q9BQF6 1050 aa35.97■■■■□ 3.35
LDB1-204ENST00000490751 RIC8AQ9NPQ8 531 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms