RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SLC5A5Q92911 643 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 DMRTA2Q96SC8 542 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 BHMT2Q9H2M3 363 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 SMURF1Q9HCE7 757 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 GPN3Q9UHW5 284 aaPredicted RBP3.69□□□□□ -1.82
UBXN4-208ENST00000490163 ZNF112Q9UJU3 913 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 ASAP1Q9ULH1 1129 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 PPP1R9AQ9ULJ8 1098 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 GJA3Q9Y6H8 435 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 B4E171 279 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 SHISA8B8ZZ34 492 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 LRIG2O94898 1065 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 PNLIPP16233 465 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 TSPAN7P41732 249 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 MAN2A2P49641 1150 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 PTPN21Q16825 1174 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 DRC7Q8IY82 874 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 FAM186BQ8IYM0 893 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 STT3BQ8TCJ2 826 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 MAML3Q96JK9 1138 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 NUP62CLQ9H1M0 184 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.69□□□□□ -1.82
UBXN4-208ENST00000490163 SMYD2Q9NRG4 433 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 USP36Q9P275 1121 aaKnown RBP3.69□□□□□ -1.82
UBXN4-208ENST00000490163 TUBD1Q9UJT1 453 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 OR2W5A6NFC9 320 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 PRSS47A8MTI9 375 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 IGF2BP3O00425 579 aaKnown RBP eCLIP3.68□□□□□ -1.829e-8■■□□□ 13.2
UBXN4-208ENST00000490163 C5AR1P21730 350 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 ID3Q02535 119 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 CDC37Q16543 378 aaPredicted RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 HP1BP3Q5SSJ5 553 aaPredicted RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 EMC10Q5UCC4 262 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 TXNDC11Q6PKC3 985 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 BBS12Q6ZW61 710 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 USP45Q70EL2 814 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 TSPYL6Q8N831 410 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 NGDNQ8NEJ9 315 aaKnown RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 NSUN6Q8TEA1 469 aaKnown RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 RSAD2Q8WXG1 361 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 ARL8AQ96BM9 186 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 GBP3Q9H0R5 595 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 RETREG1Q9H6L5 497 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 STARD7Q9NQZ5 370 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 PLSCR4Q9NRQ2 329 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 FRMPD2Q68DX3 1309 aaPredicted RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 LOC100289279A0A1B0GTE1 492 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 ZNF891A8MT65 544 aaPredicted RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 SLC16A6O15403 523 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 MAFKO60675 156 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 A1BGP04217 495 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 ITGA5P08648 1049 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 CFAP100Q494V2 611 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 ATP13A4Q4VNC1 1196 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 SWSAP1Q6NVH7 229 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 POMZP3Q6PJE2 187 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 TTLL7Q6ZT98 887 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 KRT74Q7RTS7 529 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 TMTC1Q8IUR5 882 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 CLASRPQ8N2M8 674 aaKnown RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 LSMEM1Q8N8F7 131 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 ACSBG1Q96GR2 724 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 STK33Q9BYT3 514 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 POLMQ9NP87 494 aaPredicted RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 DMRT3Q9NQL9 472 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 PCDHA4Q9UN74 947 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 PCDHGB3Q9Y5G1 929 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 URB2Q14146 1524 aaKnown RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 TCRBV5S4A2TA0A5A2 114 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 DGAT1O75907 488 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 CRTAMO95727 393 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 PF4V1P10720 104 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 NID1P14543 1247 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 ADD2P35612 726 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 IARSP41252 1262 aaKnown RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 IRX6P78412 446 aaPredicted RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 IKBKEQ14164 716 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 GAS6Q14393 721 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 ZNF787Q6DD87 383 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 KSR2Q6VAB6 950 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 BICDL1Q6ZP65 573 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 UBE2Q1Q7Z7E8 422 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 RPGRQ92834 1020 aaKnown RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 ACAP3Q96P50 834 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 DDX23Q9BUQ8 820 aaKnown RBP3.68□□□□□ -1.82
UBXN4-208ENST00000490163 NKIRAS2Q9NYR9 191 aa3.68□□□□□ -1.82
UBXN4-208ENST00000490163 CLCA1A8K7I4 914 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 H7BY64 318 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 DLL1O00548 723 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 ORC4O43929 436 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 PYGMP11217 842 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 RENBPP51606 427 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 ARFIP2P53365 341 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 FOXO4P98177 505 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 POU4F3Q15319 338 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 EFHC2Q5JST6 749 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 PIK3R6Q5UE93 754 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 ANGEL2Q5VTE6 544 aaKnown RBP3.67□□□□□ -1.82
UBXN4-208ENST00000490163 RETSATQ6NUM9 610 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 CNNM4Q6P4Q7 775 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms