RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 JADE2Q9NQC1 790 aa24.37■■□□□ 1.49
SMC4-221ENST00000489573 NR3C2P08235 984 aa24.37■■□□□ 1.49
SMC4-221ENST00000489573 ARP10275 920 aa24.37■■□□□ 1.49
SMC4-221ENST00000489573 CCNA1P78396 465 aa24.37■■□□□ 1.49
SMC4-221ENST00000489573 MDM2Q00987 491 aaPredicted RBP24.37■■□□□ 1.49
SMC4-221ENST00000489573 SPIRE1Q08AE8 756 aa24.37■■□□□ 1.49
SMC4-221ENST00000489573 PNOCQ13519 176 aa24.37■■□□□ 1.49
SMC4-221ENST00000489573 ZRSR1Q15695 479 aaKnown RBP24.37■■□□□ 1.49
SMC4-221ENST00000489573 PDXDC2PQ6P474 469 aa24.37■■□□□ 1.49
SMC4-221ENST00000489573 DNERQ8NFT8 737 aa24.37■■□□□ 1.49
SMC4-221ENST00000489573 SNX29Q8TEQ0 813 aa24.37■■□□□ 1.49
SMC4-221ENST00000489573 ZNF577Q9BSK1 485 aa24.37■■□□□ 1.49
SMC4-221ENST00000489573 ABT1Q9ULW3 272 aaKnown RBP24.37■■□□□ 1.49
SMC4-221ENST00000489573 TMEM88BA6NKF7 163 aa24.36■■□□□ 1.49
SMC4-221ENST00000489573 FOXN1O15353 648 aa24.36■■□□□ 1.49
SMC4-221ENST00000489573 PLCG1P19174 1290 aa24.36■■□□□ 1.49
SMC4-221ENST00000489573 SH3RF1Q7Z6J0 888 aa24.36■■□□□ 1.49
SMC4-221ENST00000489573 PAGE5Q96GU1 130 aa24.36■■□□□ 1.49
SMC4-221ENST00000489573 CUEDC2Q9H467 287 aa24.36■■□□□ 1.49
SMC4-221ENST00000489573 MORF4L1Q9UBU8 362 aa24.36■■□□□ 1.49
SMC4-221ENST00000489573 VAV3Q9UKW4 847 aa24.36■■□□□ 1.49
SMC4-221ENST00000489573 POTEB2H3BUK9 544 aa24.35■■□□□ 1.49
SMC4-221ENST00000489573 SLC26A4O43511 780 aa24.35■■□□□ 1.49
SMC4-221ENST00000489573 LRCH2Q5VUJ6 765 aa24.35■■□□□ 1.49
SMC4-221ENST00000489573 VSIG10LQ86VR7 867 aa24.35■■□□□ 1.49
SMC4-221ENST00000489573 GRAMD1CQ8IYS0 662 aa24.35■■□□□ 1.49
SMC4-221ENST00000489573 ANKRD13CQ8N6S4 541 aa24.35■■□□□ 1.49
SMC4-221ENST00000489573 CDK5RAP3Q96JB5 506 aa24.35■■□□□ 1.49
SMC4-221ENST00000489573 WDR11Q9BZH6 1224 aa24.35■■□□□ 1.49
SMC4-221ENST00000489573 ZCCHC17Q9NP64 241 aaKnown RBP24.35■■□□□ 1.49
SMC4-221ENST00000489573 STK24Q9Y6E0 443 aa24.35■■□□□ 1.49
SMC4-221ENST00000489573 LCTP09848 1927 aa24.35■■□□□ 1.49
SMC4-221ENST00000489573 PSMD10O75832 226 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 GRB10Q13322 594 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 MTMR1Q13613 665 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 NAALADL2Q58DX5 795 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 NCAPH2Q6IBW4 605 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 ERMNQ8TAM6 284 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 CCDC102AQ96A19 550 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 IWS1Q96ST2 819 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 PLIN2Q99541 437 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 MMP19Q99542 508 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 R3HDMLQ9H3Y0 253 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 KCNH7Q9NS40 1196 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 TUBE1Q9UJT0 475 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 KDM3AQ9Y4C1 1321 aa24.34■■□□□ 1.49
SMC4-221ENST00000489573 IPO5O00410 1097 aaKnown RBP24.33■■□□□ 1.49
SMC4-221ENST00000489573 GAS7O60861 476 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 PRR29P0C7W0 189 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 AFMP43652 599 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 CNTN2Q02246 1040 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 KCTD2Q14681 263 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 STX1AQ16623 288 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 WDR78Q5VTH9 848 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 HAUS3Q68CZ6 603 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 HHIPL1Q96JK4 782 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 PNMA5Q96PV4 448 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 RIT2Q99578 217 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 MAGEF1Q9HAY2 307 aa24.33■■□□□ 1.49
SMC4-221ENST00000489573 FAM155AB1AL88 458 aaPredicted RBP24.33■■□□□ 1.48
SMC4-221ENST00000489573 STAM2O75886 525 aa24.33■■□□□ 1.48
SMC4-221ENST00000489573 ALDH5A1P51649 535 aaPredicted RBP24.33■■□□□ 1.48
SMC4-221ENST00000489573 TMEM119Q4V9L6 283 aa24.33■■□□□ 1.48
SMC4-221ENST00000489573 FAM133AQ8N9E0 248 aa24.33■■□□□ 1.48
SMC4-221ENST00000489573 NUDT12Q9BQG2 462 aa24.33■■□□□ 1.48
SMC4-221ENST00000489573 TEKT3Q9BXF9 490 aa24.33■■□□□ 1.48
SMC4-221ENST00000489573 RBSNQ9H1K0 784 aa24.33■■□□□ 1.48
SMC4-221ENST00000489573 PORCNQ9H237 461 aa24.33■■□□□ 1.48
SMC4-221ENST00000489573 AGO4Q9HCK5 861 aaKnown RBP24.33■■□□□ 1.48
SMC4-221ENST00000489573 STK17AQ9UEE5 414 aa24.33■■□□□ 1.48
SMC4-221ENST00000489573 ADD3Q9UEY8 706 aaKnown RBP24.33■■□□□ 1.48
SMC4-221ENST00000489573 PCDHA5Q9Y5H7 936 aa24.33■■□□□ 1.48
SMC4-221ENST00000489573 IGF2BP3O00425 579 aaKnown RBP eCLIP24.32■■□□□ 1.48
SMC4-221ENST00000489573 CCT6AP40227 531 aaKnown RBP24.32■■□□□ 1.48
SMC4-221ENST00000489573 INHBEP58166 350 aa24.32■■□□□ 1.48
SMC4-221ENST00000489573 FSTL1Q12841 308 aa24.32■■□□□ 1.48
SMC4-221ENST00000489573 PPP2R5CQ13362 524 aa24.32■■□□□ 1.48
SMC4-221ENST00000489573 HYIQ5T013 277 aa24.32■■□□□ 1.48
SMC4-221ENST00000489573 OTOP1Q7RTM1 612 aa24.32■■□□□ 1.48
SMC4-221ENST00000489573 NLRX1Q86UT6 975 aa24.32■■□□□ 1.48
SMC4-221ENST00000489573 GPRASP2Q96D09 838 aa24.32■■□□□ 1.48
SMC4-221ENST00000489573 INPP4AQ96PE3 977 aaPredicted RBP24.32■■□□□ 1.48
SMC4-221ENST00000489573 EFCC1Q9HA90 598 aa24.32■■□□□ 1.48
SMC4-221ENST00000489573 ASTN1O14525 1302 aa24.31■■□□□ 1.48
SMC4-221ENST00000489573 FCER1AP12319 257 aa24.31■■□□□ 1.48
SMC4-221ENST00000489573 FAM110CQ1W6H9 321 aa24.31■■□□□ 1.48
SMC4-221ENST00000489573 LRRC15Q8TF66 581 aa24.31■■□□□ 1.48
SMC4-221ENST00000489573 SMARCE1Q969G3 411 aa24.31■■□□□ 1.48
SMC4-221ENST00000489573 NT5C3AQ9H0P0 336 aa24.31■■□□□ 1.48
SMC4-221ENST00000489573 GRPEL1Q9HAV7 217 aa24.31■■□□□ 1.48
SMC4-221ENST00000489573 ANO10Q9NW15 660 aa24.31■■□□□ 1.48
SMC4-221ENST00000489573 SOWAHBA6NEL2 793 aa24.3■■□□□ 1.48
SMC4-221ENST00000489573 GTPBP6O43824 516 aaPredicted RBP24.3■■□□□ 1.48
SMC4-221ENST00000489573 SMC2O95347 1197 aa24.3■■□□□ 1.48
SMC4-221ENST00000489573 MRE11P49959 708 aa24.3■■□□□ 1.48
SMC4-221ENST00000489573 ANO6Q4KMQ2 910 aa24.3■■□□□ 1.48
SMC4-221ENST00000489573 MTRQ99707 1265 aa24.3■■□□□ 1.48
SMC4-221ENST00000489573 DNAJC25-GNG10A0A024R161 153 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 MAFGO15525 162 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 SREBF2Q12772 1141 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms