RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 ZNF654Q8IZM8 581 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 USP38Q8NB14 1042 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 LZTS2Q9BRK4 669 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 ALG1Q9BT22 464 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 SPZ1Q9BXG8 430 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 LY9Q9HBG7 655 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 TANC1Q9C0D5 1861 aa23.23■■□□□ 1.31
CACFD1-205ENST00000489519 GGPS1O95749 300 aa23.22■■□□□ 1.31
CACFD1-205ENST00000489519 MYOGP15173 224 aa23.22■■□□□ 1.31
CACFD1-205ENST00000489519 GNAQP50148 359 aa23.22■■□□□ 1.31
CACFD1-205ENST00000489519 HSDL1Q3SXM5 330 aa23.22■■□□□ 1.31
CACFD1-205ENST00000489519 GNPTABQ3T906 1256 aa23.22■■□□□ 1.31
CACFD1-205ENST00000489519 SYMPKQ92797 1274 aaKnown RBP23.22■■□□□ 1.31
CACFD1-205ENST00000489519 RRP36Q96EU6 259 aaKnown RBP23.22■■□□□ 1.31
CACFD1-205ENST00000489519 TMEM87BQ96K49 555 aa23.22■■□□□ 1.31
CACFD1-205ENST00000489519 MLXIPQ9HAP2 919 aa23.22■■□□□ 1.31
CACFD1-205ENST00000489519 TET1Q8NFU7 2136 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 KIF28PB7ZC32 967 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 PRC1O43663 620 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 ZNF286BP0CG31 522 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 IGFBP4P22692 258 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 SP2Q02086 613 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 PTK7Q13308 1070 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 ADGRE1Q14246 886 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 LRRC8DQ7L1W4 858 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 PIBF1Q8WXW3 757 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 LSG1Q9H089 658 aaKnown RBP23.21■■□□□ 1.31
CACFD1-205ENST00000489519 VCANP13611 3396 aa23.21■■□□□ 1.31
CACFD1-205ENST00000489519 FRMPD4Q14CM0 1322 aa23.2■■□□□ 1.3
CACFD1-205ENST00000489519 CKBP12277 381 aa23.2■■□□□ 1.3
CACFD1-205ENST00000489519 UBA1P22314 1058 aaKnown RBP23.2■■□□□ 1.3
CACFD1-205ENST00000489519 NFXL1Q6ZNB6 911 aa23.2■■□□□ 1.3
CACFD1-205ENST00000489519 DHX38Q92620 1227 aaKnown RBP23.2■■□□□ 1.3
CACFD1-205ENST00000489519 CUL5Q93034 780 aa23.2■■□□□ 1.3
CACFD1-205ENST00000489519 ESYT1Q9BSJ8 1104 aa23.2■■□□□ 1.3
CACFD1-205ENST00000489519 SEC63Q9UGP8 760 aaKnown RBP23.2■■□□□ 1.3
CACFD1-205ENST00000489519 CCDC69A6NI79 296 aa23.19■■□□□ 1.3
CACFD1-205ENST00000489519 ICAM3P32942 547 aa23.19■■□□□ 1.3
CACFD1-205ENST00000489519 HERC6Q8IVU3 1022 aa23.19■■□□□ 1.3
CACFD1-205ENST00000489519 PPM1EQ8WY54 764 aa23.19■■□□□ 1.3
CACFD1-205ENST00000489519 INPP4AQ96PE3 977 aaPredicted RBP23.19■■□□□ 1.3
CACFD1-205ENST00000489519 PIK3CDO00329 1044 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 SLC27A2O14975 620 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 SORBS3O60504 671 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 CA3P07451 260 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 CALM1P0DP23 149 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 CALM2P0DP24 149 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 CALM3P0DP25 149 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 LIFRP42702 1097 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 KCNJ6P48051 423 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 MRPS9P82933 396 aaKnown RBP23.18■■□□□ 1.3
CACFD1-205ENST00000489519 NEDD9Q14511 834 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 GPNMBQ14956 572 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 XRRA1Q6P2D8 792 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 SMARCC2Q8TAQ2 1214 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 ZFP91Q96JP5 570 aaPredicted RBP23.18■■□□□ 1.3
CACFD1-205ENST00000489519 C16orf70Q9BSU1 422 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 MYL10Q9BUA6 226 aa23.18■■□□□ 1.3
CACFD1-205ENST00000489519 SPATA31C2B4DYI2 1134 aa23.17■■□□□ 1.3
CACFD1-205ENST00000489519 SH2B2O14492 632 aaPredicted RBP23.17■■□□□ 1.3
CACFD1-205ENST00000489519 CXCL10P02778 98 aa23.17■■□□□ 1.3
CACFD1-205ENST00000489519 NECTIN1Q15223 517 aa23.17■■□□□ 1.3
CACFD1-205ENST00000489519 TJAP1Q5JTD0 557 aa23.17■■□□□ 1.3
CACFD1-205ENST00000489519 CNKSR3Q6P9H4 555 aa23.17■■□□□ 1.3
CACFD1-205ENST00000489519 ATXN2LQ8WWM7 1075 aaKnown RBP23.17■■□□□ 1.3
CACFD1-205ENST00000489519 GPKOWQ92917 476 aaPredicted RBP eCLIP23.17■■□□□ 1.3
CACFD1-205ENST00000489519 TRANK1O15050 2925 aa23.16■■□□□ 1.3
CACFD1-205ENST00000489519 H3BRB1 525 aa23.16■■□□□ 1.3
CACFD1-205ENST00000489519 NOP56O00567 594 aaKnown RBP23.16■■□□□ 1.3
CACFD1-205ENST00000489519 FIBPO43427 364 aa23.16■■□□□ 1.3
CACFD1-205ENST00000489519 CREB3L3Q68CJ9 461 aa23.16■■□□□ 1.3
CACFD1-205ENST00000489519 METTL7BQ6UX53 244 aa23.16■■□□□ 1.3
CACFD1-205ENST00000489519 USP26Q9BXU7 913 aa23.16■■□□□ 1.3
CACFD1-205ENST00000489519 TUT1Q9H6E5 874 aaKnown RBP23.16■■□□□ 1.3
CACFD1-205ENST00000489519 ABHD14A-ACY1A0A1B0GW23 586 aa23.15■■□□□ 1.3
CACFD1-205ENST00000489519 MEIS2O14770 477 aa23.15■■□□□ 1.3
CACFD1-205ENST00000489519 NBNO60934 754 aa23.15■■□□□ 1.3
CACFD1-205ENST00000489519 EFCAB14O75071 495 aa23.15■■□□□ 1.3
CACFD1-205ENST00000489519 CCDC85BQ15834 202 aaPredicted RBP23.15■■□□□ 1.3
CACFD1-205ENST00000489519 TRIM71Q2Q1W2 868 aaKnown RBP23.15■■□□□ 1.3
CACFD1-205ENST00000489519 PCNX4Q63HM2 1172 aa23.15■■□□□ 1.3
CACFD1-205ENST00000489519 USP17L6PQ6QN14 398 aa23.15■■□□□ 1.3
CACFD1-205ENST00000489519 SRBD1Q8N5C6 995 aaKnown RBP23.15■■□□□ 1.3
CACFD1-205ENST00000489519 ANO2Q9NQ90 1003 aa23.15■■□□□ 1.3
CACFD1-205ENST00000489519 RTEL1Q9NZ71 1219 aa23.15■■□□□ 1.3
CACFD1-205ENST00000489519 SLC12A7Q9Y666 1083 aa23.15■■□□□ 1.3
CACFD1-205ENST00000489519 TLL1O43897 1013 aa23.14■■□□□ 1.29
CACFD1-205ENST00000489519 PLEKHA8P1O95397 391 aa23.14■■□□□ 1.29
CACFD1-205ENST00000489519 WDR5P61964 334 aaKnown RBP23.14■■□□□ 1.29
CACFD1-205ENST00000489519 ZNF200P98182 395 aaPredicted RBP23.14■■□□□ 1.29
CACFD1-205ENST00000489519 IKBKEQ14164 716 aa23.14■■□□□ 1.29
CACFD1-205ENST00000489519 BMP2KLQ5H9B9 411 aa23.14■■□□□ 1.29
CACFD1-205ENST00000489519 ZNF618Q5T7W0 954 aa23.14■■□□□ 1.29
CACFD1-205ENST00000489519 RNF20Q5VTR2 975 aa23.14■■□□□ 1.29
CACFD1-205ENST00000489519 SERINC5Q86VE9 423 aa23.14■■□□□ 1.29
CACFD1-205ENST00000489519 SENP7Q9BQF6 1050 aa23.14■■□□□ 1.29
CACFD1-205ENST00000489519 TSPYL2Q9H2G4 693 aaPredicted RBP23.14■■□□□ 1.29
CACFD1-205ENST00000489519 PSTPIP2Q9H939 334 aa23.14■■□□□ 1.29
CACFD1-205ENST00000489519 PRDM6Q9NQX0 595 aa23.14■■□□□ 1.29
CACFD1-205ENST00000489519 THEGQ9P2T0 379 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms