RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 STK24Q9Y6E0 443 aa12.95□□□□□ -0.34
C9orf3-220ENST00000489318 KDM3AQ9Y4C1 1321 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 WDR81Q562E7 1941 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 DNAJC25-GNG10A0A024R161 153 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 IGF2BP3O00425 579 aaKnown RBP eCLIP12.94□□□□□ -0.34
C9orf3-220ENST00000489318 NR3C2P08235 984 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 CCND2P30279 289 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 INHBEP58166 350 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 CCNA1P78396 465 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 PPP2R5CQ13362 524 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 KARSQ15046 597 aaKnown RBP12.94□□□□□ -0.34
C9orf3-220ENST00000489318 TMEM119Q4V9L6 283 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 NT5DC1Q5TFE4 455 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 ARHGEF16Q5VV41 709 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 NCAPG2Q86XI2 1143 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 CKAP2LQ8IYA6 745 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 ANKRD35Q8N283 1001 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 PDILTQ8N807 584 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 GPRC5AQ8NFJ5 357 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 SPATA20Q8TB22 786 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 CCDC102AQ96A19 550 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 DHX58Q96C10 678 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 GPRASP2Q96D09 838 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 CCDC34Q96HJ3 373 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 PURBQ96QR8 312 aaKnown RBP12.94□□□□□ -0.34
C9orf3-220ENST00000489318 RIT2Q99578 217 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 SDF4Q9BRK5 362 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 CCDC39Q9UFE4 941 aa12.94□□□□□ -0.34
C9orf3-220ENST00000489318 HOOK1Q9UJC3 728 aaKnown RBP12.94□□□□□ -0.34
C9orf3-220ENST00000489318 MAFGO15525 162 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 CCDC192P0DO97 292 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 ARP10275 920 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 CDC25AP30304 524 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 ALDH5A1P51649 535 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-220ENST00000489318 TYRO3Q06418 890 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 GRB10Q13322 594 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 POSTNQ15063 836 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 HAUS3Q68CZ6 603 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 ABRAQ8N0Z2 381 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 KCTD17Q8N5Z5 321 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 LRRC15Q8TF66 581 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 GJA10Q969M2 543 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 FGD4Q96M96 766 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 PNMA5Q96PV4 448 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 WDR11Q9BZH6 1224 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 R3HDMLQ9H3Y0 253 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 TSPY26PQ9H489 355 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 KCNH7Q9NS40 1196 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 STK17AQ9UEE5 414 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 ADD3Q9UEY8 706 aaKnown RBP12.93□□□□□ -0.34
C9orf3-220ENST00000489318 MGAMO43451 1857 aa12.93□□□□□ -0.34
C9orf3-220ENST00000489318 DHX15O43143 795 aaKnown RBP12.92□□□□□ -0.34
C9orf3-220ENST00000489318 MARCH6O60337 910 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 RGS20O76081 388 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 MYL1P05976 194 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 PLCG1P19174 1290 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 STAT6P42226 847 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 SARSP49591 514 aaKnown RBP12.92□□□□□ -0.34
C9orf3-220ENST00000489318 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 MTMR1Q13613 665 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 KCTD2Q14681 263 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 LRCH2Q5VUJ6 765 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 KRT79Q5XKE5 535 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 OTOP1Q7RTM1 612 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 CEP57L1Q8IYX8 460 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 ANKRD13CQ8N6S4 541 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 MORC4Q8TE76 937 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 SNX29Q8TEQ0 813 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 CALML4Q96GE6 196 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 PAGE5Q96GU1 130 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 NUDT12Q9BQG2 462 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 ZNF577Q9BSK1 485 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 NT5C3AQ9H0P0 336 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 PORCNQ9H237 461 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 DOCK5Q9H7D0 1870 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 AGO4Q9HCK5 861 aaKnown RBP12.92□□□□□ -0.34
C9orf3-220ENST00000489318 KBTBD4Q9NVX7 518 aa12.92□□□□□ -0.34
C9orf3-220ENST00000489318 SOWAHBA6NEL2 793 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 GOLGA6L3A6NEY3 463 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 IPO5O00410 1097 aaKnown RBP12.91□□□□□ -0.34
C9orf3-220ENST00000489318 FOXN1O15353 648 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 CAVIN2O95810 425 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 MUTP22033 750 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 ICAM3P32942 547 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 CNTN2Q02246 1040 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 DPYDQ12882 1025 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 SEMA3FQ13275 785 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 ITGB3BPQ13352 177 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-220ENST00000489318 PNOCQ13519 176 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 STX1AQ16623 288 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 RRAGBQ5VZM2 374 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 SASS6Q6UVJ0 657 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 NLRX1Q86UT6 975 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 TRIML1Q8N9V2 468 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 ERMNQ8TAM6 284 aa12.91□□□□□ -0.34
C9orf3-220ENST00000489318 CDHR1Q96JP9 859 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms