RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 ZNF274Q96GC6 653 aaPredicted RBP27.54■■■□□ 2
PTPN18-213ENST00000489215 ALDH8A1Q9H2A2 487 aaPredicted RBP27.54■■■□□ 2
PTPN18-213ENST00000489215 SCN10AQ9Y5Y9 1956 aa27.54■■■□□ 2
PTPN18-213ENST00000489215 SPATA31C2B4DYI2 1134 aa27.53■■■□□ 2
PTPN18-213ENST00000489215 PRPF3O43395 683 aaKnown RBP27.53■■■□□ 2
PTPN18-213ENST00000489215 PFKFB3Q16875 520 aaPredicted RBP27.53■■■□□ 2
PTPN18-213ENST00000489215 NBPF20Q3BBV1 942 aa27.53■■■□□ 2
PTPN18-213ENST00000489215 PCDHA6Q9UN73 950 aa27.53■■■□□ 2
PTPN18-213ENST00000489215 PCDHA8Q9Y5H6 950 aa27.53■■■□□ 2
PTPN18-213ENST00000489215 SMCO2A6NFE2 343 aa27.52■■■□□ 2
PTPN18-213ENST00000489215 MAFGO15525 162 aa27.52■■■□□ 2
PTPN18-213ENST00000489215 GGPS1O95749 300 aa27.52■■■□□ 2
PTPN18-213ENST00000489215 SCG2P13521 617 aa27.52■■■□□ 2
PTPN18-213ENST00000489215 PDIA3P30101 505 aaKnown RBP27.52■■■□□ 2
PTPN18-213ENST00000489215 ADCY7P51828 1080 aa27.52■■■□□ 2
PTPN18-213ENST00000489215 GPR153Q6NV75 609 aa27.52■■■□□ 2
PTPN18-213ENST00000489215 SPATA33Q96N06 139 aa27.52■■■□□ 2
PTPN18-213ENST00000489215 SENP7Q9BQF6 1050 aa27.52■■■□□ 2
PTPN18-213ENST00000489215 RNF26Q9BY78 433 aaPredicted RBP27.52■■■□□ 2
PTPN18-213ENST00000489215 PDRG1Q9NUG6 133 aa27.52■■■□□ 2
PTPN18-213ENST00000489215 STXBP3O00186 592 aa27.51■■□□□ 1.99
PTPN18-213ENST00000489215 B4GALT4O60513 344 aa27.51■■□□□ 1.99
PTPN18-213ENST00000489215 UBA1P22314 1058 aaKnown RBP27.51■■□□□ 1.99
PTPN18-213ENST00000489215 ITGB8P26012 769 aa27.51■■□□□ 1.99
PTPN18-213ENST00000489215 PPIGQ13427 754 aaKnown RBP eCLIP27.51■■□□□ 1.992e-7■■■■□ 21.8
PTPN18-213ENST00000489215 FAM47CQ5HY64 1035 aa27.51■■□□□ 1.99
PTPN18-213ENST00000489215 GPRASP2Q96D09 838 aa27.51■■□□□ 1.99
PTPN18-213ENST00000489215 RTEL1Q9NZ71 1219 aa27.51■■□□□ 1.99
PTPN18-213ENST00000489215 HOXD8P13378 290 aaPredicted RBP27.5■■□□□ 1.99
PTPN18-213ENST00000489215 IFNAR1P17181 557 aa27.5■■□□□ 1.99
PTPN18-213ENST00000489215 AP3B2Q13367 1082 aa27.5■■□□□ 1.99
PTPN18-213ENST00000489215 TOB2Q14106 344 aaPredicted RBP27.5■■□□□ 1.99
PTPN18-213ENST00000489215 UBE2SQ16763 222 aa27.5■■□□□ 1.99
PTPN18-213ENST00000489215 CPLX2Q6PUV4 134 aaKnown RBP27.5■■□□□ 1.99
PTPN18-213ENST00000489215 HIPK3Q9H422 1215 aa27.5■■□□□ 1.99
PTPN18-213ENST00000489215 RANBP2P49792 3224 aaKnown RBP27.49■■□□□ 1.99
PTPN18-213ENST00000489215 ESYT2A0FGR8 921 aa27.49■■□□□ 1.99
PTPN18-213ENST00000489215 SP2Q02086 613 aa27.49■■□□□ 1.99
PTPN18-213ENST00000489215 METTL7BQ6UX53 244 aa27.49■■□□□ 1.99
PTPN18-213ENST00000489215 SESTD1Q86VW0 696 aa27.49■■□□□ 1.99
PTPN18-213ENST00000489215 TRIM22Q8IYM9 498 aa27.49■■□□□ 1.99
PTPN18-213ENST00000489215 UPF3BQ9BZI7 483 aaKnown RBP27.49■■□□□ 1.99
PTPN18-213ENST00000489215 TRPV6Q9H1D0 765 aa27.49■■□□□ 1.99
PTPN18-213ENST00000489215 C6orf50Q9HD87 102 aa27.49■■□□□ 1.99
PTPN18-213ENST00000489215 NOP56O00567 594 aaKnown RBP27.48■■□□□ 1.99
PTPN18-213ENST00000489215 GNA11P29992 359 aa27.48■■□□□ 1.99
PTPN18-213ENST00000489215 ANKRD1Q15327 319 aa27.48■■□□□ 1.99
PTPN18-213ENST00000489215 HSDL1Q3SXM5 330 aa27.48■■□□□ 1.99
PTPN18-213ENST00000489215 ZFP91Q96JP5 570 aaPredicted RBP27.48■■□□□ 1.99
PTPN18-213ENST00000489215 NOD1Q9Y239 953 aa27.48■■□□□ 1.99
PTPN18-213ENST00000489215 CPLX1O14810 134 aa27.47■■□□□ 1.99
PTPN18-213ENST00000489215 SHHQ15465 462 aa27.47■■□□□ 1.99
PTPN18-213ENST00000489215 NTRK3Q16288 839 aa27.47■■□□□ 1.99
PTPN18-213ENST00000489215 CCDC148Q8NFR7 591 aa27.47■■□□□ 1.99
PTPN18-213ENST00000489215 PPP1R12CQ9BZL4 782 aa27.47■■□□□ 1.99
PTPN18-213ENST00000489215 ZMYND12Q9H0C1 365 aa27.47■■□□□ 1.99
PTPN18-213ENST00000489215 F2P00734 622 aa27.46■■□□□ 1.99
PTPN18-213ENST00000489215 CCT2P78371 535 aaKnown RBP27.46■■□□□ 1.99
PTPN18-213ENST00000489215 TYW1BQ6NUM6 668 aa27.46■■□□□ 1.99
PTPN18-213ENST00000489215 C7orf31Q8N865 590 aa27.46■■□□□ 1.99
PTPN18-213ENST00000489215 BICD2Q8TD16 824 aa27.46■■□□□ 1.99
PTPN18-213ENST00000489215 KAT2BQ92831 832 aa27.46■■□□□ 1.99
PTPN18-213ENST00000489215 UBIAD1Q9Y5Z9 338 aa27.46■■□□□ 1.99
PTPN18-213ENST00000489215 PSEN2P49810 448 aa27.45■■□□□ 1.98
PTPN18-213ENST00000489215 CHMP4BP1P59074 171 aa27.45■■□□□ 1.98
PTPN18-213ENST00000489215 MTMR1Q13613 665 aa27.45■■□□□ 1.98
PTPN18-213ENST00000489215 CYFIP1Q7L576 1253 aa27.45■■□□□ 1.98
PTPN18-213ENST00000489215 RPUSD2Q8IZ73 545 aaKnown RBP27.45■■□□□ 1.98
PTPN18-213ENST00000489215 CCDC155Q8N6L0 562 aa27.45■■□□□ 1.98
PTPN18-213ENST00000489215 NOC4LQ9BVI4 516 aaKnown RBP27.45■■□□□ 1.98
PTPN18-213ENST00000489215 SLC26A6Q9BXS9 759 aa27.45■■□□□ 1.98
PTPN18-213ENST00000489215 JADE2Q9NQC1 790 aa27.45■■□□□ 1.98
PTPN18-213ENST00000489215 SH3GLB2Q9NR46 395 aa27.45■■□□□ 1.98
PTPN18-213ENST00000489215 TRMT13Q9NUP7 481 aaKnown RBP27.45■■□□□ 1.98
PTPN18-213ENST00000489215 CLK2P49760 499 aaKnown RBP27.44■■□□□ 1.98
PTPN18-213ENST00000489215 SSRP1Q08945 709 aaKnown RBP27.44■■□□□ 1.98
PTPN18-213ENST00000489215 BFSP2Q13515 415 aa27.44■■□□□ 1.98
PTPN18-213ENST00000489215 MFSD10Q14728 455 aa27.44■■□□□ 1.98
PTPN18-213ENST00000489215 PKN1Q16512 942 aa27.44■■□□□ 1.98
PTPN18-213ENST00000489215 PSRC1Q6PGN9 363 aaPredicted RBP27.44■■□□□ 1.98
PTPN18-213ENST00000489215 FAM177A1Q8N128 213 aaPredicted RBP27.44■■□□□ 1.98
PTPN18-213ENST00000489215 PHKBQ93100 1093 aa27.44■■□□□ 1.98
PTPN18-213ENST00000489215 IL17RAQ96F46 866 aa27.44■■□□□ 1.98
PTPN18-213ENST00000489215 ANO3Q9BYT9 981 aa27.44■■□□□ 1.98
PTPN18-213ENST00000489215 PCDH10Q9P2E7 1040 aa27.44■■□□□ 1.98
PTPN18-213ENST00000489215 HAS3O00219 553 aa27.43■■□□□ 1.98
PTPN18-213ENST00000489215 PITPNM1O00562 1244 aa27.43■■□□□ 1.98
PTPN18-213ENST00000489215 CYP2C18P33260 490 aa27.43■■□□□ 1.98
PTPN18-213ENST00000489215 SEMA3FQ13275 785 aa27.43■■□□□ 1.98
PTPN18-213ENST00000489215 PTGISQ16647 500 aa27.43■■□□□ 1.98
PTPN18-213ENST00000489215 KIAA0753Q2KHM9 967 aa27.43■■□□□ 1.98
PTPN18-213ENST00000489215 RETREG2Q8NC44 543 aa27.43■■□□□ 1.98
PTPN18-213ENST00000489215 CDKL5O76039 1030 aa27.42■■□□□ 1.98
PTPN18-213ENST00000489215 CSF2RAP15509 400 aa27.42■■□□□ 1.98
PTPN18-213ENST00000489215 ITGB5P18084 799 aa27.42■■□□□ 1.98
PTPN18-213ENST00000489215 SREBF1P36956 1147 aa27.42■■□□□ 1.98
PTPN18-213ENST00000489215 C9orf50Q5SZB4 431 aa27.42■■□□□ 1.98
PTPN18-213ENST00000489215 RNPC3Q96LT9 517 aaKnown RBP27.42■■□□□ 1.98
PTPN18-213ENST00000489215 MXRA8Q9BRK3 442 aa27.42■■□□□ 1.98
PTPN18-213ENST00000489215 ALG1Q9BT22 464 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms