RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 SUMO1P63165 101 aaKnown RBP5.69□□□□□ -1.5
RFC4-213ENST00000489028 DLX2Q07687 328 aaPredicted RBP5.69□□□□□ -1.5
RFC4-213ENST00000489028 BMS1Q14692 1282 aaKnown RBP5.69□□□□□ -1.5
RFC4-213ENST00000489028 TCERG1LQ5VWI1 586 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 STEAP3Q658P3 488 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 ADGRG2Q8IZP9 1017 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 ARRDC4Q8NCT1 418 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.69□□□□□ -1.5
RFC4-213ENST00000489028 PIP4K2CQ8TBX8 421 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 DDX11Q96FC9 970 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 ZFYVE21Q9BQ24 234 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 CDK11AQ9UQ88 783 aaPredicted RBP5.69□□□□□ -1.5
RFC4-213ENST00000489028 ZNF652Q9Y2D9 606 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 FAN1Q9Y2M0 1017 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 MRPS23Q9Y3D9 190 aaKnown RBP5.69□□□□□ -1.5
RFC4-213ENST00000489028 ADAMTS20P59510 1910 aa5.69□□□□□ -1.5
RFC4-213ENST00000489028 HGSO14964 777 aaPredicted RBP5.68□□□□□ -1.5
RFC4-213ENST00000489028 DGKIO75912 1065 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 FBLN7Q53RD9 439 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 ETV3LQ6ZN32 361 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 FAM126BQ8IXS8 530 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 IFNL3Q8IZI9 196 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 DRC1Q96MC2 740 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 KCNJ15Q99712 375 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 GORASP1Q9BQQ3 440 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 DHRS4Q9BTZ2 278 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 LNPKQ9C0E8 428 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 IPPKQ9H8X2 491 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 PCDHB4Q9Y5E5 795 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 PMF1-BGLAPU3KQ54 211 aa5.68□□□□□ -1.5
RFC4-213ENST00000489028 A0A1B0GTL3 188 aa5.67□□□□□ -1.5
RFC4-213ENST00000489028 SOD2P04179 222 aa5.67□□□□□ -1.5
RFC4-213ENST00000489028 COL6A2P12110 1019 aa5.67□□□□□ -1.5
RFC4-213ENST00000489028 LONRF2Q1L5Z9 754 aa5.67□□□□□ -1.5
RFC4-213ENST00000489028 KIZQ2M2Z5 673 aa5.67□□□□□ -1.5
RFC4-213ENST00000489028 CR1LQ2VPA4 569 aa5.67□□□□□ -1.5
RFC4-213ENST00000489028 HABP4Q5JVS0 413 aaKnown RBP5.67□□□□□ -1.5
RFC4-213ENST00000489028 TMEM151BQ8IW70 566 aa5.67□□□□□ -1.5
RFC4-213ENST00000489028 RBM12BQ8IXT5 1001 aaKnown RBP5.67□□□□□ -1.5
RFC4-213ENST00000489028 ZNF526Q8TF50 670 aaPredicted RBP5.67□□□□□ -1.5
RFC4-213ENST00000489028 KANSL2Q9H9L4 492 aa5.67□□□□□ -1.5
RFC4-213ENST00000489028 SPATA6Q9NWH7 488 aaPredicted RBP5.67□□□□□ -1.5
RFC4-213ENST00000489028 PTCH2Q9Y6C5 1203 aa5.67□□□□□ -1.5
RFC4-213ENST00000489028 NKRFO15226 690 aaKnown RBP eCLIP5.66□□□□□ -1.5
RFC4-213ENST00000489028 CYP2C8P10632 490 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 C2orf27AQ580R0 203 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 CD300LDQ6UXZ3 194 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 OTOP3Q7RTS5 596 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 MAMDC2Q7Z304 686 aaPredicted RBP5.66□□□□□ -1.5
RFC4-213ENST00000489028 SAPCD2Q86UD0 394 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 STK32CQ86UX6 486 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 LINC01356Q8N9X3 169 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 THAP3Q8WTV1 239 aaPredicted RBP5.66□□□□□ -1.5
RFC4-213ENST00000489028 UBXN4Q92575 508 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 PTPRN2Q92932 1015 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 KCNC2Q96PR1 638 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 PIF1Q9H611 641 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 SLC6A20Q9NP91 592 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 MYOTQ9UBF9 498 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 ASH2LQ9UBL3 628 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 WASF3Q9UPY6 502 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 TELO2Q9Y4R8 837 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 PCDHA8Q9Y5H6 950 aa5.66□□□□□ -1.5
RFC4-213ENST00000489028 TCRBV5S4A2TA0A5A2 114 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 SLC27A2O14975 620 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 LTFP02788 710 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 BMP7P18075 431 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 CAP1Q01518 475 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 SMAD4Q13485 552 aaKnown RBP5.65□□□□□ -1.5
RFC4-213ENST00000489028 CHRNA2Q15822 529 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 CCDC144BQ3MJ40 725 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 LINC00482Q8N8I6 264 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 MARCH10Q8NA82 808 aaPredicted RBP5.65□□□□□ -1.5
RFC4-213ENST00000489028 SYT8Q8NBV8 401 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 PCDH19Q8TAB3 1148 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 CLEC4DQ8WXI8 215 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 SMOC1Q9H4F8 434 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 ZSWIM4Q9H7M6 989 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 SLC52A2Q9HAB3 445 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 RBPJLQ9UBG7 517 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 PCDHA9Q9Y5H5 950 aa5.65□□□□□ -1.5
RFC4-213ENST00000489028 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 ARVCFO00192 962 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 AQP7O14520 342 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 LRG1P02750 347 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 INHBBP09529 407 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 GNAT1P11488 350 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 ITGA1P56199 1179 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 GABREP78334 506 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 SQSTM1Q13501 440 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 LIPIQ6XZB0 460 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 MTDHQ86UE4 582 aaKnown RBP5.64□□□□□ -1.51
RFC4-213ENST00000489028 NLGN1Q8N2Q7 840 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 GSTCDQ8NEC7 633 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 ZSWIM2Q8NEG5 633 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 UHMK1Q8TAS1 419 aaKnown RBP5.64□□□□□ -1.51
RFC4-213ENST00000489028 SLC7A14Q8TBB6 771 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 SH3RF2Q8TEC5 729 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 ZBTB8AQ96BR9 441 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms