RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 GTF2F1P35269 517 aaKnown RBP eCLIP3.98□□□□□ -1.77
CALD1-221ENST00000489019 FOXO4P98177 505 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 KCNAB2Q13303 367 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 HSP90AA2PQ14568 343 aaPredicted RBP3.98□□□□□ -1.77
CALD1-221ENST00000489019 KCTD13Q8WZ19 329 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 PWWP2AQ96N64 755 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 SYT3Q9BQG1 590 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 AARSD1Q9BTE6 412 aaKnown RBP3.98□□□□□ -1.77
CALD1-221ENST00000489019 RNF38Q9H0F5 515 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 CDIP1Q9H305 208 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 NUDT5Q9UKK9 219 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 CDK11AQ9UQ88 783 aaPredicted RBP3.98□□□□□ -1.77
CALD1-221ENST00000489019 X6R8D5 127 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 KIAA0586Q9BVV6 1533 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.98□□□□□ -1.77
CALD1-221ENST00000489019 GRIN2AQ12879 1464 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 NCOA2Q15596 1464 aa3.98□□□□□ -1.77
CALD1-221ENST00000489019 MYOM3Q5VTT5 1437 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 UGGT2Q9NYU1 1516 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 KIAA0556O60303 1618 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 BLACEA4D250 179 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 CCDC85CA6NKD9 419 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 FFAR3O14843 346 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 PDPK1O15530 556 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 PRODHO43272 600 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 ZBTB7AO95365 584 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 PABPC1P11940 636 aaKnown RBP3.97□□□□□ -1.77
CALD1-221ENST00000489019 HTRA3P83110 453 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 SERINC3Q13530 473 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 SLC9A5Q14940 896 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 TARBP2Q15633 366 aaKnown RBP3.97□□□□□ -1.77
CALD1-221ENST00000489019 NTRK3Q16288 839 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 VWA3BQ502W6 1294 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 MROH9Q5TGP6 573 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 DCP2Q8IU60 420 aaKnown RBP3.97□□□□□ -1.77
CALD1-221ENST00000489019 RIOX2Q8IUF8 465 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 MARCH10Q8NA82 808 aaPredicted RBP3.97□□□□□ -1.77
CALD1-221ENST00000489019 TP53I13Q8NBR0 393 aaPredicted RBP3.97□□□□□ -1.77
CALD1-221ENST00000489019 OSBP2Q969R2 916 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 TRMT2BQ96GJ1 504 aaKnown RBP3.97□□□□□ -1.77
CALD1-221ENST00000489019 TMEM169Q96HH4 297 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 KCNC2Q96PR1 638 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 LRRIQ1Q96JM4 1722 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 SYNJ2O15056 1496 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 MAGI1Q96QZ7 1491 aaPredicted RBP3.97□□□□□ -1.77
CALD1-221ENST00000489019 ADAMTS20P59510 1910 aa3.97□□□□□ -1.77
CALD1-221ENST00000489019 EPRSP07814 1512 aaKnown RBP3.96□□□□□ -1.78
CALD1-221ENST00000489019 CDK13Q14004 1512 aaKnown RBP3.96□□□□□ -1.78
CALD1-221ENST00000489019 PTPN23Q9H3S7 1636 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 IQCA1LA6NCM1 817 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 MYO1BO43795 1136 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 ADCY3O60266 1144 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 DIAPH1O60610 1272 aaKnown RBP3.96□□□□□ -1.78
CALD1-221ENST00000489019 INHBBP09529 407 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 FGFR1P11362 822 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 BMP7P18075 431 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 SLC6A11P48066 632 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 GTF2A2P52657 109 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 DLX2Q07687 328 aaPredicted RBP3.96□□□□□ -1.78
CALD1-221ENST00000489019 RBL2Q08999 1139 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 LSAMPQ13449 338 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 RASGRF1Q13972 1273 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 NBPF6Q5VWK0 638 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 KCNT2Q6UVM3 1135 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 USP53Q70EK8 1073 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 MILR1Q7Z6M3 343 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 B3GNT8Q7Z7M8 397 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 TMEM151BQ8IW70 566 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 ADGRG2Q8IZP9 1017 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 LRRC47Q8N1G4 583 aaKnown RBP3.96□□□□□ -1.78
CALD1-221ENST00000489019 LINC01356Q8N9X3 169 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 SMARCC2Q8TAQ2 1214 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 FNIP1Q8TF40 1166 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 CPA5Q8WXQ8 436 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 SEC14L1Q92503 715 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 CHAMP1Q96JM3 812 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 NBPF4Q96M43 638 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 YTHDC1Q96MU7 727 aaKnown RBP3.96□□□□□ -1.78
CALD1-221ENST00000489019 NOX5Q96PH1 765 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 PHF20Q9BVI0 1012 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 SPATA9Q9BWV2 254 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 CCDC113Q9H0I3 377 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 CLDND1Q9NY35 253 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 PPARGC1AQ9UBK2 798 aaKnown RBP3.96□□□□□ -1.78
CALD1-221ENST00000489019 PPP1R1BQ9UD71 204 aaPredicted RBP3.96□□□□□ -1.78
CALD1-221ENST00000489019 PFDN2Q9UHV9 154 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 PALD1Q9ULE6 856 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 FAN1Q9Y2M0 1017 aa3.96□□□□□ -1.78
CALD1-221ENST00000489019 RAPGEF6Q8TEU7 1601 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 TRAV20A0A0B4J274 112 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 A0A1B0GTL3 188 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 FAM221BA6H8Z2 402 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 H7BY64 318 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 U2SURPO15042 1029 aaKnown RBP3.95□□□□□ -1.78
CALD1-221ENST00000489019 C8BP07358 591 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 CACNB2Q08289 660 aaPredicted RBP3.95□□□□□ -1.78
CALD1-221ENST00000489019 RASA3Q14644 834 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 MTERF2Q49AM1 385 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 FOXB2Q5VYV0 432 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms