RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 DENND5AQ6IQ26 1287 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 RSPO2Q6UXX9 243 aaPredicted RBP5.28□□□□□ -1.56
KDM3A-213ENST00000488971 SIRT2Q8IXJ6 389 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 OR2W6PQ8NHA6 318 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 COPS5Q92905 334 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 USP7Q93009 1102 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 C20orf173Q96LM9 149 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 ZDHHC15Q96MV8 337 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 PSMD1Q99460 953 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 ZFYVE21Q9BQ24 234 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 GFOD1Q9NXC2 390 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 APOBEC2Q9Y235 224 aaKnown RBP5.28□□□□□ -1.56
KDM3A-213ENST00000488971 GPR55Q9Y2T6 319 aaPredicted RBP5.28□□□□□ -1.56
KDM3A-213ENST00000488971 TRAF6Q9Y4K3 522 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 NPFFR2Q9Y5X5 522 aa5.28□□□□□ -1.56
KDM3A-213ENST00000488971 LOC102724159A0A0B4J2E5 919 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 SHISA3A0PJX4 238 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 OR14I1A6ND48 311 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 NEMP1O14524 444 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 PSPNO60542 156 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 PEX14O75381 377 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 APPP05067 770 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 KCNA6P17658 529 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 RPL10P27635 214 aaKnown RBP5.27□□□□□ -1.57
KDM3A-213ENST00000488971 GNALP38405 381 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 ECI1P42126 302 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 RAB27AP51159 221 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 SCNN1BP51168 640 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 PIN1Q13526 163 aaPredicted RBP5.27□□□□□ -1.57
KDM3A-213ENST00000488971 PWP2Q15269 919 aaKnown RBP5.27□□□□□ -1.57
KDM3A-213ENST00000488971 ACBD5Q5T8D3 534 aaPredicted RBP5.27□□□□□ -1.57
KDM3A-213ENST00000488971 USP53Q70EK8 1073 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 TMEM151BQ8IW70 566 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 WDR75Q8IWA0 830 aaKnown RBP5.27□□□□□ -1.57
KDM3A-213ENST00000488971 CHMP4CQ96CF2 233 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 MTMR8Q96EF0 704 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 WNK4Q96J92 1243 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 CAMKK2Q96RR4 588 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 DSCC1Q9BVC3 393 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 TRIM8Q9BZR9 551 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 CDH19Q9H159 772 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 MYH16Q9H6N6 1097 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 SPEF1Q9Y4P9 236 aa5.27□□□□□ -1.57
KDM3A-213ENST00000488971 SSU72P8A0A1W2PR75 194 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 H0Y8X5 98 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 ARVCFO00192 962 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 VAMP4O75379 141 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 TMPRSS15P98073 1019 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 POU4F1Q01851 419 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 SCRN1Q12765 414 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 LRRC41Q15345 812 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 SLC14A2Q15849 920 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 ADGRF1Q5T601 910 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 PIK3R6Q5UE93 754 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 SYDE2Q5VT97 1194 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 ABHD17CQ6PCB6 329 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 TMC3Q7Z5M5 1100 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 DDX53Q86TM3 631 aaKnown RBP5.26□□□□□ -1.57
KDM3A-213ENST00000488971 CNTD1Q8N815 330 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 NPLOC4Q8TAT6 608 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 KRTAP4-5Q9BYR2 181 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.26□□□□□ -1.57
KDM3A-213ENST00000488971 CRTAC1Q9NQ79 661 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 CHST7Q9NS84 486 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 ZIM2Q9NZV7 527 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 SAMD15Q9P1V8 674 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 EBF1Q9UH73 591 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 PCDHA9Q9Y5H5 950 aa5.26□□□□□ -1.57
KDM3A-213ENST00000488971 K7ESF4 209 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 CBX4O00257 560 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 GABRDO14764 452 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 USP2O75604 605 aaPredicted RBP5.25□□□□□ -1.57
KDM3A-213ENST00000488971 PRAMEF1O95521 474 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 F2P00734 622 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 GSNP06396 782 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 THBDP07204 575 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 GPR85P60893 370 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 SRSF3P84103 164 aaKnown RBP5.25□□□□□ -1.57
KDM3A-213ENST00000488971 GUCY1A3Q02108 690 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 DSG1Q02413 1049 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 NMIQ13287 307 aaPredicted RBP5.25□□□□□ -1.57
KDM3A-213ENST00000488971 HLTFQ14527 1009 aaKnown RBP eCLIP5.25□□□□□ -1.57
KDM3A-213ENST00000488971 KCNT2Q6UVM3 1135 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 RNF111Q6ZNA4 994 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 WAPLQ7Z5K2 1190 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 PASD1Q8IV76 773 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 PPIL6Q8IXY8 311 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 CHPFQ8IZ52 775 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 MYO1HQ8N1T3 1032 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.25□□□□□ -1.57
KDM3A-213ENST00000488971 ENOX1Q8TC92 643 aaKnown RBP5.25□□□□□ -1.57
KDM3A-213ENST00000488971 FRS2Q8WU20 508 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 LINC01599Q8WXQ3 324 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 SHISA4Q96DD7 197 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 SMAD5Q99717 465 aaKnown RBP5.25□□□□□ -1.57
KDM3A-213ENST00000488971 MCMBPQ9BTE3 642 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 MENTQ9BUN1 341 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 CCDC8Q9H0W5 538 aaPredicted RBP5.25□□□□□ -1.57
KDM3A-213ENST00000488971 GCM1Q9NP62 436 aa5.25□□□□□ -1.57
KDM3A-213ENST00000488971 GPR27Q9NS67 375 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms