RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 RGS20O76081 388 aa21.97■■□□□ 1.11
CCM2-216ENST00000488727 ARHGAP4P98171 946 aa21.97■■□□□ 1.11
CCM2-216ENST00000488727 ACVR2BQ13705 512 aa21.97■■□□□ 1.11
CCM2-216ENST00000488727 SAFBQ15424 915 aaKnown RBP eCLIP21.97■■□□□ 1.11
CCM2-216ENST00000488727 PIK3AP1Q6ZUJ8 805 aa21.97■■□□□ 1.11
CCM2-216ENST00000488727 KRT25Q7Z3Z0 450 aa21.97■■□□□ 1.11
CCM2-216ENST00000488727 ARMC5Q96C12 935 aa21.97■■□□□ 1.11
CCM2-216ENST00000488727 EHMT1Q9H9B1 1298 aa21.97■■□□□ 1.11
CCM2-216ENST00000488727 CCND3P30281 292 aaPredicted RBP21.97■■□□□ 1.11
CCM2-216ENST00000488727 TBCKQ8TEA7 893 aa21.97■■□□□ 1.11
CCM2-216ENST00000488727 ZNF333Q96JL9 665 aa21.97■■□□□ 1.11
CCM2-216ENST00000488727 PDGFCQ9NRA1 345 aa21.97■■□□□ 1.11
CCM2-216ENST00000488727 ZHX1Q9UKY1 873 aaPredicted RBP21.97■■□□□ 1.11
CCM2-216ENST00000488727 CCDC194A0A1B0GVG4 234 aa21.96■■□□□ 1.11
CCM2-216ENST00000488727 NONOQ15233 471 aaKnown RBP eCLIP21.96■■□□□ 1.11
CCM2-216ENST00000488727 MTFR1Q15390 333 aa21.96■■□□□ 1.11
CCM2-216ENST00000488727 TAPT1Q6NXT6 567 aa21.96■■□□□ 1.11
CCM2-216ENST00000488727 RNF214Q8ND24 703 aa21.96■■□□□ 1.11
CCM2-216ENST00000488727 FOXP1Q9H334 677 aaPredicted RBP21.96■■□□□ 1.11
CCM2-216ENST00000488727 VTA1Q9NP79 307 aa21.96■■□□□ 1.11
CCM2-216ENST00000488727 RTEL1Q9NZ71 1219 aa21.96■■□□□ 1.11
CCM2-216ENST00000488727 NRBP1Q9UHY1 535 aa21.96■■□□□ 1.11
CCM2-216ENST00000488727 EIF3JO75822 258 aaKnown RBP21.95■■□□□ 1.1
CCM2-216ENST00000488727 MYCP01106 439 aaPredicted RBP21.95■■□□□ 1.1
CCM2-216ENST00000488727 INF2Q27J81 1249 aa21.95■■□□□ 1.1
CCM2-216ENST00000488727 DDX19AQ9NUU7 478 aaKnown RBP21.95■■□□□ 1.1
CCM2-216ENST00000488727 ADCY6O43306 1168 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 CYP3A4P08684 503 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 U2AF2P26368 475 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCM2-216ENST00000488727 XRRA1Q6P2D8 792 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 INPP4AQ96PE3 977 aaPredicted RBP21.94■■□□□ 1.1
CCM2-216ENST00000488727 UNC93B1Q9H1C4 597 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 TFIP11Q9UBB9 837 aaKnown RBP21.94■■□□□ 1.1
CCM2-216ENST00000488727 ITGB5P18084 799 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 ADCYAP1R1P41586 468 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 CCDC144BQ3MJ40 725 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 TMEM63BQ5T3F8 832 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 SEPT14Q6ZU15 432 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 ZSCAN30Q86W11 494 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 CYP2W1Q8TAV3 490 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 NUP62CLQ9H1M0 184 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 UBIAD1Q9Y5Z9 338 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 FRMPD3Q5JV73 1810 aa21.94■■□□□ 1.1
CCM2-216ENST00000488727 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.93■■□□□ 1.1
CCM2-216ENST00000488727 GOLGA6L4A6NEF3 574 aa21.93■■□□□ 1.1
CCM2-216ENST00000488727 STAM2O75886 525 aa21.93■■□□□ 1.1
CCM2-216ENST00000488727 LIG1P18858 919 aa21.93■■□□□ 1.1
CCM2-216ENST00000488727 NOSTRINQ8IVI9 506 aa21.93■■□□□ 1.1
CCM2-216ENST00000488727 HMX1Q9NP08 348 aaPredicted RBP21.93■■□□□ 1.1
CCM2-216ENST00000488727 RBM47A0AV96 593 aaKnown RBP21.92■■□□□ 1.1
CCM2-216ENST00000488727 FAM86B1E9PN63 330 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 ARIH2O95376 493 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 FAM86B2P0C5J1 330 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 CCL5P13501 91 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 CNGA1P29973 690 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 GNL2Q13823 731 aaKnown RBP21.92■■□□□ 1.1
CCM2-216ENST00000488727 RBM43Q6ZSC3 357 aaKnown RBP21.92■■□□□ 1.1
CCM2-216ENST00000488727 ZNF396Q96N95 335 aaPredicted RBP21.92■■□□□ 1.1
CCM2-216ENST00000488727 WDR11Q9BZH6 1224 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 RCOR1Q9UKL0 485 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 SEPT4O43236 478 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 PTGS1P23219 599 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 USP11P51784 963 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 SEMA3FQ13275 785 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 NEK8Q86SG6 692 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 LENG1Q96BZ8 264 aaPredicted RBP21.92■■□□□ 1.1
CCM2-216ENST00000488727 MXRA8Q9BRK3 442 aa21.92■■□□□ 1.1
CCM2-216ENST00000488727 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.92■■□□□ 1.1
CCM2-216ENST00000488727 DOCK5Q9H7D0 1870 aa21.91■■□□□ 1.1
CCM2-216ENST00000488727 IGLV3-22A0A075B6J6 115 aa21.91■■□□□ 1.1
CCM2-216ENST00000488727 WNT7AO00755 349 aa21.91■■□□□ 1.1
CCM2-216ENST00000488727 CIITAP33076 1130 aa21.91■■□□□ 1.1
CCM2-216ENST00000488727 CEP55Q53EZ4 464 aa21.91■■□□□ 1.1
CCM2-216ENST00000488727 ANO1Q5XXA6 986 aa21.91■■□□□ 1.1
CCM2-216ENST00000488727 SCFD2Q8WU76 684 aa21.91■■□□□ 1.1
CCM2-216ENST00000488727 JADE2Q9NQC1 790 aa21.91■■□□□ 1.1
CCM2-216ENST00000488727 PAK6Q9NQU5 681 aaPredicted RBP21.91■■□□□ 1.1
CCM2-216ENST00000488727 TDP2O95551 362 aa21.9■■□□□ 1.1
CCM2-216ENST00000488727 CCDC192P0DO97 292 aa21.9■■□□□ 1.1
CCM2-216ENST00000488727 AKR1A1P14550 325 aa21.9■■□□□ 1.1
CCM2-216ENST00000488727 SMPD1P17405 629 aa21.9■■□□□ 1.1
CCM2-216ENST00000488727 LETM2Q2VYF4 491 aa21.9■■□□□ 1.1
CCM2-216ENST00000488727 GNPTABQ3T906 1256 aa21.9■■□□□ 1.1
CCM2-216ENST00000488727 GJC2Q5T442 439 aaPredicted RBP21.9■■□□□ 1.1
CCM2-216ENST00000488727 CCDC62Q6P9F0 684 aa21.9■■□□□ 1.1
CCM2-216ENST00000488727 RNF208Q9H0X6 261 aa21.9■■□□□ 1.1
CCM2-216ENST00000488727 CLSTN2Q9H4D0 955 aa21.9■■□□□ 1.1
CCM2-216ENST00000488727 FAM184BQ9ULE4 1060 aa21.9■■□□□ 1.1
CCM2-216ENST00000488727 MEIS1O00470 390 aa21.89■■□□□ 1.1
CCM2-216ENST00000488727 ZNF76P36508 570 aa21.89■■□□□ 1.1
CCM2-216ENST00000488727 TPRNQ4KMQ1 711 aa21.89■■□□□ 1.1
CCM2-216ENST00000488727 LENG9Q96B70 501 aa21.89■■□□□ 1.1
CCM2-216ENST00000488727 GPRASP2Q96D09 838 aa21.89■■□□□ 1.1
CCM2-216ENST00000488727 DDX20Q9UHI6 824 aaKnown RBP21.89■■□□□ 1.1
CCM2-216ENST00000488727 SPATA31C2B4DYI2 1134 aa21.89■■□□□ 1.09
CCM2-216ENST00000488727 TXNP10599 105 aaKnown RBP21.89■■□□□ 1.09
CCM2-216ENST00000488727 ICAM3P32942 547 aa21.89■■□□□ 1.09
CCM2-216ENST00000488727 SP2Q02086 613 aa21.89■■□□□ 1.09
CCM2-216ENST00000488727 TNFAIP2Q03169 654 aa21.89■■□□□ 1.09
CCM2-216ENST00000488727 MTMR1Q13613 665 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms