RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MIB1Q86YT6 1006 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 TEX2Q8IWB9 1127 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 CDK5RAP1Q96SZ6 601 aaKnown RBP5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 DNAJC2Q99543 621 aaKnown RBP5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 DEF6Q9H4E7 631 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 PHAXQ9H814 394 aaKnown RBP5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 SUGT1Q9Y2Z0 365 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 SMAD7O15105 426 aaKnown RBP5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 GPR42O15529 346 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 CASP7P55210 303 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 SURF1Q15526 300 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 NFE2L2Q16236 605 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 LARP1BQ659C4 914 aaKnown RBP5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 CIR1Q86X95 450 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 PMFBP1Q8TBY8 1022 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 PLEKHO2Q8TD55 490 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 ZSWIM3Q96MP5 696 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 PCED1AQ9H1Q7 454 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 CD248Q9HCU0 757 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 JADE2Q9NQC1 790 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 HS3ST3A1Q9Y663 406 aa5.66□□□□□ -1.5
HMGB1P36-201ENST00000487709 THBDP07204 575 aa5.65□□□□□ -1.5
HMGB1P36-201ENST00000487709 PLS3P13797 630 aa5.65□□□□□ -1.5
HMGB1P36-201ENST00000487709 ZNF28P17035 718 aa5.65□□□□□ -1.5
HMGB1P36-201ENST00000487709 ETFBP38117 255 aa5.65□□□□□ -1.5
HMGB1P36-201ENST00000487709 KLF10Q13118 480 aa5.65□□□□□ -1.5
HMGB1P36-201ENST00000487709 IGDCC4Q8TDY8 1250 aa5.65□□□□□ -1.5
HMGB1P36-201ENST00000487709 DPF3Q92784 378 aa5.65□□□□□ -1.5
HMGB1P36-201ENST00000487709 YIPF4Q9BSR8 244 aa5.65□□□□□ -1.5
HMGB1P36-201ENST00000487709 SIRPGQ9P1W8 387 aa5.65□□□□□ -1.5
HMGB1P36-201ENST00000487709 ING1Q9UK53 422 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P36-201ENST00000487709 C9orf118A6NHY6 69 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 C22orf46C9J442 243 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 SLC7A5Q01650 507 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 RBL2Q08999 1139 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 GRB10Q13322 594 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 NCAPHQ15003 741 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 SPDYAQ5MJ70 313 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 MILR1Q7Z6M3 343 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 FAM126BQ8IXS8 530 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 ARHGEF39Q8N4T4 335 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 SEC14L1Q92503 715 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 L2HGDHQ9H9P8 463 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 GPRC5CQ9NQ84 441 aa5.64□□□□□ -1.51
HMGB1P36-201ENST00000487709 DDAH1O94760 285 aa5.63□□□□□ -1.51
HMGB1P36-201ENST00000487709 FPR2P25090 351 aa5.63□□□□□ -1.51
HMGB1P36-201ENST00000487709 SCRN1Q12765 414 aa5.63□□□□□ -1.51
HMGB1P36-201ENST00000487709 ADAM9Q13443 819 aa5.63□□□□□ -1.51
HMGB1P36-201ENST00000487709 RAB33AQ14088 237 aa5.63□□□□□ -1.51
HMGB1P36-201ENST00000487709 HNRNPLLQ8WVV9 542 aaKnown RBP5.63□□□□□ -1.51
HMGB1P36-201ENST00000487709 MRFAP1L1Q96HT8 127 aa5.63□□□□□ -1.51
HMGB1P36-201ENST00000487709 PTPN18Q99952 460 aa5.63□□□□□ -1.51
HMGB1P36-201ENST00000487709 OSBPL2Q9H1P3 480 aa5.63□□□□□ -1.51
HMGB1P36-201ENST00000487709 TCAF1Q9Y4C2 921 aa5.63□□□□□ -1.51
HMGB1P36-201ENST00000487709 A0A1W2PQH9 124 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 AGRPO00253 132 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 MUSKO15146 869 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 KCNH1O95259 989 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 SELENOPP49908 381 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 NKX3-2P78367 333 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 IFRD2Q12894 506 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 CR1LQ2VPA4 569 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 ARHGEF18Q6ZSZ5 1173 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 DNERQ8NFT8 737 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 MBD6Q96DN6 1003 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 TMEM168Q9H0V1 697 aa5.62□□□□□ -1.51
HMGB1P36-201ENST00000487709 IGSF3O75054 1194 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 IL13P35225 146 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 PPP2CBP62714 309 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 PPP2CAP67775 309 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 DDR2Q16832 855 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 INF2Q27J81 1249 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 VHLLQ6RSH7 139 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 EEPD1Q7L9B9 569 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 KBTBD2Q8IY47 623 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 FAM169BQ8N8A8 192 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 KLHL6Q8WZ60 621 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 RCC1LQ96I51 464 aaKnown RBP5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 YTHDC1Q96MU7 727 aaKnown RBP5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 SRPK1Q96SB4 655 aaKnown RBP5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 MMP19Q99542 508 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 ZSWIM4Q9H7M6 989 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 APEX2Q9UBZ4 518 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 CROTQ9UKG9 612 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 AKT3Q9Y243 479 aa5.61□□□□□ -1.51
HMGB1P36-201ENST00000487709 SLC6A11P48066 632 aa5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 EPHB4P54760 987 aa5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 MLLT6P55198 1093 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 RBM10P98175 930 aaKnown RBP5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 R3HDM1Q15032 1099 aaKnown RBP5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 DPH6Q7L8W6 267 aa5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 LRP10Q7Z4F1 713 aa5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 COPS5Q92905 334 aa5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 MKL1Q969V6 931 aa5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 WWC2-AS2Q96NR7 200 aa5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 CLIC6Q96NY7 704 aa5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 ZNF341Q9BYN7 854 aa5.6□□□□□ -1.51
HMGB1P36-201ENST00000487709 IQCA1LA6NCM1 817 aa5.59□□□□□ -1.51
HMGB1P36-201ENST00000487709 CCDC85CA6NKD9 419 aa5.59□□□□□ -1.51
HMGB1P36-201ENST00000487709 KLF4O43474 513 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms