RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 KIAA0753Q2KHM9 967 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 HSDL1Q3SXM5 330 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 LRRC8DQ7L1W4 858 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 CATIPQ7Z7H3 387 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 CCDC155Q8N6L0 562 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 SPATA33Q96N06 139 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 SLC9A7Q96T83 725 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 KATNAL1Q9BW62 490 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 BCAS3Q9H6U6 928 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 TRIP12Q14669 1992 aaPredicted RBP14.13□□□□□ -0.15
VPS16-208ENST00000487461 GBF1Q92538 1859 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 RFXAPO00287 272 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 NBNO60934 754 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 ARHGEF15O94989 841 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 CKBP12277 381 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 UBA1P22314 1058 aaKnown RBP14.12□□□□□ -0.15
VPS16-208ENST00000487461 RBL2Q08999 1139 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 COL9A3Q14050 684 aaPredicted RBP14.12□□□□□ -0.15
VPS16-208ENST00000487461 TCTN1Q2MV58 587 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 TRIM71Q2Q1W2 868 aaKnown RBP14.12□□□□□ -0.15
VPS16-208ENST00000487461 TJAP1Q5JTD0 557 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 HERC6Q8IVU3 1022 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 SYMPKQ92797 1274 aaKnown RBP14.12□□□□□ -0.15
VPS16-208ENST00000487461 WNT8BQ93098 351 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 C16orf70Q9BSU1 422 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 MYL10Q9BUA6 226 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 CERS4Q9HA82 394 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 LY9Q9HBG7 655 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 TTC28Q96AY4 2481 aa14.12□□□□□ -0.15
VPS16-208ENST00000487461 BAIAP3O94812 1187 aa14.11□□□□□ -0.15
VPS16-208ENST00000487461 CXCL10P02778 98 aa14.11□□□□□ -0.15
VPS16-208ENST00000487461 MRPS9P82933 396 aaKnown RBP14.11□□□□□ -0.15
VPS16-208ENST00000487461 PTK7Q13308 1070 aa14.11□□□□□ -0.15
VPS16-208ENST00000487461 TRAF7Q6Q0C0 670 aa14.11□□□□□ -0.15
VPS16-208ENST00000487461 ZNF654Q8IZM8 581 aa14.11□□□□□ -0.15
VPS16-208ENST00000487461 ATXN2LQ8WWM7 1075 aaKnown RBP14.11□□□□□ -0.15
VPS16-208ENST00000487461 MAP3K14Q99558 947 aa14.11□□□□□ -0.15
VPS16-208ENST00000487461 LSG1Q9H089 658 aaKnown RBP14.11□□□□□ -0.15
VPS16-208ENST00000487461 MLXIPQ9HAP2 919 aa14.11□□□□□ -0.15
VPS16-208ENST00000487461 MYH7BA7E2Y1 1941 aa14.1□□□□□ -0.15
VPS16-208ENST00000487461 EPOPA6NHQ4 379 aa14.1□□□□□ -0.15
VPS16-208ENST00000487461 KIF28PB7ZC32 967 aa14.1□□□□□ -0.15
VPS16-208ENST00000487461 WDR5P61964 334 aaKnown RBP14.1□□□□□ -0.15
VPS16-208ENST00000487461 TAP1Q03518 808 aa14.1□□□□□ -0.15
VPS16-208ENST00000487461 SEMA3FQ13275 785 aa14.1□□□□□ -0.15
VPS16-208ENST00000487461 ZNF618Q5T7W0 954 aa14.1□□□□□ -0.15
VPS16-208ENST00000487461 TMCO2Q7Z6W1 182 aaPredicted RBP14.1□□□□□ -0.15
VPS16-208ENST00000487461 ASB2Q96Q27 587 aa14.1□□□□□ -0.15
VPS16-208ENST00000487461 SPZ1Q9BXG8 430 aa14.1□□□□□ -0.15
VPS16-208ENST00000487461 RTEL1Q9NZ71 1219 aa14.1□□□□□ -0.15
VPS16-208ENST00000487461 FRMPD4Q14CM0 1322 aa14.1□□□□□ -0.15
VPS16-208ENST00000487461 SPTBN5Q9NRC6 3674 aaKnown RBP14.09□□□□□ -0.15
VPS16-208ENST00000487461 CHD7Q9P2D1 2997 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 SPATA31C2B4DYI2 1134 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 SLC27A2O14975 620 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 PRC1O43663 620 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 DDAH1O94760 285 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 PARNO95453 639 aaKnown RBP14.09□□□□□ -0.15
VPS16-208ENST00000487461 POU3F3P20264 500 aaPredicted RBP14.09□□□□□ -0.15
VPS16-208ENST00000487461 SMARCA1P28370 1054 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 ICAM3P32942 547 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 KCNJ6P48051 423 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 MBTPS1Q14703 1052 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 CNKSR3Q6P9H4 555 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 USP17L6PQ6QN14 398 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 CASC1Q6TDU7 716 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 SPRED2Q7Z698 418 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 MICALL1Q8N3F8 863 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 SRBD1Q8N5C6 995 aaKnown RBP14.09□□□□□ -0.15
VPS16-208ENST00000487461 CTCFLQ8NI51 663 aaPredicted RBP14.09□□□□□ -0.15
VPS16-208ENST00000487461 RRP36Q96EU6 259 aaKnown RBP14.09□□□□□ -0.15
VPS16-208ENST00000487461 INPP4AQ96PE3 977 aaPredicted RBP14.09□□□□□ -0.15
VPS16-208ENST00000487461 MTA3Q9BTC8 594 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 THEGQ9P2T0 379 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 TELO2Q9Y4R8 837 aa14.09□□□□□ -0.15
VPS16-208ENST00000487461 H3BRB1 525 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 SH2B2O14492 632 aaPredicted RBP14.08□□□□□ -0.16
VPS16-208ENST00000487461 MEIS2O14770 477 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 TLL1O43897 1013 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 STAM2O75886 525 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 PLEKHA8P1O95397 391 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 LGALS2P05162 132 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 RXRAP19793 462 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 KIF5BP33176 963 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 MCM5P33992 734 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 DEFB103AP81534 67 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 MRPS5P82675 430 aaKnown RBP14.08□□□□□ -0.16
VPS16-208ENST00000487461 NECTIN1Q15223 517 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 GNPTABQ3T906 1256 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 KRT40Q6A162 431 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 CYFIP1Q7L576 1253 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 CMTR1Q8N1G2 835 aaKnown RBP14.08□□□□□ -0.16
VPS16-208ENST00000487461 TMTC2Q8N394 836 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 ARNTL2Q8WYA1 636 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 LZTS2Q9BRK4 669 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 ESYT1Q9BSJ8 1104 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 TUT1Q9H6E5 874 aaKnown RBP14.08□□□□□ -0.16
VPS16-208ENST00000487461 MTCH2Q9Y6C9 303 aa14.08□□□□□ -0.16
VPS16-208ENST00000487461 ABHD14A-ACY1A0A1B0GW23 586 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 C17orf102A2RUQ5 167 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms