RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 MRPL11Q9Y3B7 192 aaKnown RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 LAMA2P24043 3122 aaKnown RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 CNTNAP5Q8WYK1 1306 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 GOLGA8BA8MQT2 603 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 ZBTB43O43298 467 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 ARIH2O95376 493 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 HMGB1P09429 215 aaKnown RBP8.28□□□□□ -1.08
UBE4B-209ENST00000487244 CALM1P0DP23 149 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 CALM2P0DP24 149 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 CALM3P0DP25 149 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 RPS6KB1P23443 525 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 CDC27P30260 824 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 GCGRP47871 477 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 ACLYP53396 1101 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 GHRHRQ02643 423 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 PDE4DQ08499 809 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 FUT2Q10981 343 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 KCNA10Q16322 511 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 TRIM60Q495X7 471 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 BLOC1S2Q6QNY1 142 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 NOL8Q76FK4 1167 aaKnown RBP8.28□□□□□ -1.08
UBE4B-209ENST00000487244 RNF180Q86T96 592 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 TLK2Q86UE8 772 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 MCF2L2Q86YR7 1114 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 KLHDC9Q8NEP7 349 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 DNERQ8NFT8 737 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 COPS5Q92905 334 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 GPKOWQ92917 476 aaPredicted RBP eCLIP8.28□□□□□ -1.08
UBE4B-209ENST00000487244 RRP36Q96EU6 259 aaKnown RBP8.28□□□□□ -1.08
UBE4B-209ENST00000487244 RMDN3Q96TC7 470 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 UPF3BQ9BZI7 483 aaKnown RBP8.28□□□□□ -1.08
UBE4B-209ENST00000487244 PXMP2Q9NR77 195 aa8.28□□□□□ -1.08
UBE4B-209ENST00000487244 NAP1L2Q9ULW6 460 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-209ENST00000487244 LAMA3Q16787 3333 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 RBM47A0AV96 593 aaKnown RBP8.27□□□□□ -1.09
UBE4B-209ENST00000487244 GOLGA8AA7E2F4 631 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 PPFIA3O75145 1194 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 NR1I2O75469 434 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 ASGR1P07306 291 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 CST5P28325 142 aaPredicted RBP8.27□□□□□ -1.09
UBE4B-209ENST00000487244 SMARCA1P28370 1054 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 GNAQP50148 359 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 GJA9P57773 515 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 RTP1P59025 263 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 FGD1P98174 961 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 TOB2Q14106 344 aaPredicted RBP8.27□□□□□ -1.09
UBE4B-209ENST00000487244 SNX17Q15036 470 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 RTN1Q16799 776 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 GNASQ5JWF2 1037 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 SLC39A5Q6ZMH5 540 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 FCHSD1Q86WN1 690 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 NSUN6Q8TEA1 469 aaKnown RBP8.27□□□□□ -1.09
UBE4B-209ENST00000487244 LZTS2Q9BRK4 669 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 AGXT2Q9BYV1 514 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 WDR11Q9BZH6 1224 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 SEC63Q9UGP8 760 aaKnown RBP8.27□□□□□ -1.09
UBE4B-209ENST00000487244 ATP11BQ9Y2G3 1177 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 SCN10AQ9Y5Y9 1956 aa8.27□□□□□ -1.09
UBE4B-209ENST00000487244 NID2Q14112 1375 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 LOC102724159A0A0B4J2E5 919 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 GCOM1H8Y6P7 765 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-209ENST00000487244 MEIS2O14770 477 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 DYNC1LI2O43237 492 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-209ENST00000487244 EPB41L2O43491 1005 aaKnown RBP8.26□□□□□ -1.09
UBE4B-209ENST00000487244 RGS20O76081 388 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 NR3C2P08235 984 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 POLR2MP0CAP2 368 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 ADD1P35611 737 aaKnown RBP8.26□□□□□ -1.09
UBE4B-209ENST00000487244 NKX3-2P78367 333 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 PGM5Q15124 567 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 PWP2Q15269 919 aaKnown RBP8.26□□□□□ -1.09
UBE4B-209ENST00000487244 FSCN1Q16658 493 aaKnown RBP8.26□□□□□ -1.09
UBE4B-209ENST00000487244 UBE2SQ16763 222 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 DUSP28Q4G0W2 176 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 ARHGEF16Q5VV41 709 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 WWC2Q6AWC2 1192 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 IQSEC1Q6DN90 963 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 USP17L6PQ6QN14 398 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 CXCL17Q6UXB2 119 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 SYNE3Q6ZMZ3 975 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 SEPT14Q6ZU15 432 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 RUFY3Q7L099 469 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 HEATR3Q7Z4Q2 680 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 SH3RF1Q7Z6J0 888 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 PDCD2LQ9BRP1 358 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 TSEN34Q9BSV6 310 aaKnown RBP8.26□□□□□ -1.09
UBE4B-209ENST00000487244 NCOA5Q9HCD5 579 aaKnown RBP8.26□□□□□ -1.09
UBE4B-209ENST00000487244 NR2E3Q9Y5X4 410 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 FRMPD4Q14CM0 1322 aa8.26□□□□□ -1.09
UBE4B-209ENST00000487244 MOXD2PA6NHM9 499 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 ADAMTS3O15072 1205 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 SORBS3O60504 671 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 PQBP1O60828 265 aaKnown RBP8.25□□□□□ -1.09
UBE4B-209ENST00000487244 DTNBO60941 627 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 TXNP10599 105 aaKnown RBP8.25□□□□□ -1.09
UBE4B-209ENST00000487244 MYCLP12524 364 aaPredicted RBP8.25□□□□□ -1.09
UBE4B-209ENST00000487244 CD46P15529 392 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 PSMA5P28066 241 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 MAGEA10P43363 369 aaPredicted RBP8.25□□□□□ -1.09
UBE4B-209ENST00000487244 METAP2P50579 478 aaKnown RBP eCLIP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms