RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 A0A0U1RQG5 324 aaPredicted RBP11.7□□□□□ -0.54
NEK4-204ENST00000487068 RBM47A0AV96 593 aaKnown RBP11.7□□□□□ -0.54
NEK4-204ENST00000487068 PRPF3O43395 683 aaKnown RBP11.7□□□□□ -0.54
NEK4-204ENST00000487068 ARIH2O95376 493 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 IFNAR1P17181 557 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 EVCP57679 992 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 KCNV1Q6PIU1 500 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 DHX37Q8IY37 1157 aaKnown RBP11.7□□□□□ -0.54
NEK4-204ENST00000487068 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 GLT8D2Q9H1C3 349 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 C6orf50Q9HD87 102 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 RIC8AQ9NPQ8 531 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 POLR3EQ9NVU0 708 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 RTEL1Q9NZ71 1219 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 VPS54Q9P1Q0 977 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 PCDHA6Q9UN73 950 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 PCDHA8Q9Y5H6 950 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 SCN5AQ14524 2016 aa11.7□□□□□ -0.54
NEK4-204ENST00000487068 ELP1O95163 1332 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
NEK4-204ENST00000487068 STAM2O75886 525 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 CABYRO75952 493 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 GGPS1O95749 300 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 NLRP5P59047 1200 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 SP4Q02446 784 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 SCRN1Q12765 414 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 FAM47CQ5HY64 1035 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 PCNX4Q63HM2 1172 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 NLRX1Q86UT6 975 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 VSIG10LQ86VR7 867 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 REXO1Q8N1G1 1221 aaKnown RBP11.69□□□□□ -0.54
NEK4-204ENST00000487068 ANO3Q9BYT9 981 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 TPCN1Q9ULQ1 816 aa11.69□□□□□ -0.54
NEK4-204ENST00000487068 DCDC2CA8MYV0 355 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
NEK4-204ENST00000487068 CTAGE5O15320 804 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 FIBPO43427 364 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 DEXIO95424 95 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 FOSP01100 380 aaPredicted RBP11.68□□□□□ -0.54
NEK4-204ENST00000487068 MMP3P08254 477 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 CLTBP09497 229 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 UBA1P22314 1058 aaKnown RBP11.68□□□□□ -0.54
NEK4-204ENST00000487068 GNA11P29992 359 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 ZNF76P36508 570 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 PSMC6P62333 389 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 TLE2Q04725 743 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 AP3B2Q13367 1082 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 CCSAPQ6IQ19 270 aaPredicted RBP11.68□□□□□ -0.54
NEK4-204ENST00000487068 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.68□□□□□ -0.54
NEK4-204ENST00000487068 BICD2Q8TD16 824 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 AFG1LQ8WV93 481 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 SPATA33Q96N06 139 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 LBHD1Q9BQE6 289 aaPredicted RBP11.68□□□□□ -0.54
NEK4-204ENST00000487068 MTG1Q9BT17 334 aaPredicted RBP11.68□□□□□ -0.54
NEK4-204ENST00000487068 COL25A1Q9BXS0 654 aaPredicted RBP11.68□□□□□ -0.54
NEK4-204ENST00000487068 MLXIPQ9HAP2 919 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 TMEM260Q9NX78 707 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 PKD2L1Q9P0L9 805 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 LOXHD1Q8IVV2 1947 aa11.68□□□□□ -0.54
NEK4-204ENST00000487068 ESYT2A0FGR8 921 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 RGS20O76081 388 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 LARGE1O95461 756 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 ZNF286BP0CG31 522 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 XBP1P17861 261 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 MRPS9P82933 396 aaKnown RBP11.67□□□□□ -0.54
NEK4-204ENST00000487068 MDM2Q00987 491 aaPredicted RBP11.67□□□□□ -0.54
NEK4-204ENST00000487068 ARHGAP1Q07960 439 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 MTMR1Q13613 665 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 ITGA7Q13683 1181 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 SNX17Q15036 470 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 NTRK3Q16288 839 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 PKN1Q16512 942 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 DGKDQ16760 1214 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 XRRA1Q6P2D8 792 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 CCDC62Q6P9F0 684 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 HS6ST3Q8IZP7 471 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 NECAB1Q8N987 351 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 CDHR1Q96JP9 859 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 INPP4AQ96PE3 977 aaPredicted RBP11.67□□□□□ -0.54
NEK4-204ENST00000487068 PDLIM7Q9NR12 457 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 DDX41Q9UJV9 622 aaKnown RBP11.67□□□□□ -0.54
NEK4-204ENST00000487068 GBF1Q92538 1859 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 A0A0C4DFX4 3053 aa11.67□□□□□ -0.54
NEK4-204ENST00000487068 A6NJR5 290 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 ARVCFO00192 962 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 KPNA6O60684 536 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 PFKFB2O60825 505 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 DTNBO60941 627 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 TGFB3P10600 412 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 NKX3-2P78367 333 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 PURAQ00577 322 aaKnown RBP11.66□□□□□ -0.54
NEK4-204ENST00000487068 LAMC2Q13753 1193 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 NEDD9Q14511 834 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 GSE1Q14687 1217 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 CELF3Q5SZQ8 465 aaKnown RBP11.66□□□□□ -0.54
NEK4-204ENST00000487068 C1orf53Q5VUE5 145 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 PPTC7Q8NI37 304 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 RASGRP4Q8TDF6 673 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms