RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TBC1D1Q86TI0 1168 aaPredicted RBP11.71□□□□□ -0.54
CCDC171-208ENST00000486641 ENAHQ8N8S7 591 aaPredicted RBP11.71□□□□□ -0.54
CCDC171-208ENST00000486641 CCDC197Q8NCU1 140 aa11.71□□□□□ -0.54
CCDC171-208ENST00000486641 CCDC47Q96A33 483 aaKnown RBP11.71□□□□□ -0.54
CCDC171-208ENST00000486641 CHMP6Q96FZ7 201 aa11.71□□□□□ -0.54
CCDC171-208ENST00000486641 ZNF570Q96NI8 536 aa11.71□□□□□ -0.54
CCDC171-208ENST00000486641 NACAP1Q9BZK3 213 aa11.71□□□□□ -0.54
CCDC171-208ENST00000486641 NDST4Q9H3R1 872 aa11.71□□□□□ -0.54
CCDC171-208ENST00000486641 SLC12A4Q9UP95 1085 aa11.71□□□□□ -0.54
CCDC171-208ENST00000486641 ANKRD33BA6NCL7 494 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 KLRC1P26715 233 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 ICA1Q05084 483 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 CUL1Q13616 776 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 ERMARDQ5T6L9 678 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 VGLL2Q8N8G2 317 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 EIF1ADQ8N9N8 165 aaKnown RBP11.7□□□□□ -0.54
CCDC171-208ENST00000486641 AGAP11Q8TF27 550 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 SAAL1Q96ER3 474 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 L3MBTL3Q96JM7 780 aaPredicted RBP11.7□□□□□ -0.54
CCDC171-208ENST00000486641 SH3GL3Q99963 347 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 RNF41Q9H4P4 317 aaPredicted RBP11.7□□□□□ -0.54
CCDC171-208ENST00000486641 CNNM1Q9NRU3 951 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 MYH7BA7E2Y1 1941 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 GLI3P10071 1580 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 MINDY4BA8MYZ0 360 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 MYL1P05976 194 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 ITGA6P23229 1130 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 ADCY2Q08462 1091 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 MAP3K12Q12852 859 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 NAB2Q15742 525 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 CAPRIN2Q6IMN6 1127 aaKnown RBP11.7□□□□□ -0.54
CCDC171-208ENST00000486641 MIS18BP1Q6P0N0 1132 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 CATIPQ7Z7H3 387 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 HPS3Q969F9 1004 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 XPO6Q96QU8 1125 aaKnown RBP11.7□□□□□ -0.54
CCDC171-208ENST00000486641 SEMA6BQ9H3T3 888 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 SWAP70Q9UH65 585 aa11.7□□□□□ -0.54
CCDC171-208ENST00000486641 BAZ2BQ9UIF8 2168 aaKnown RBP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 ENO4A6NNW6 628 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 RBAK-RBAKDNI3L0D1 243 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 SMNDC1O75940 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 PDE6BP35913 854 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 TROAPQ12815 778 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 HLFQ16534 295 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 NBPF20Q3BBV1 942 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 TDRD12Q587J7 1177 aaKnown RBP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 CCDC178Q5BJE1 867 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 PDXDC1Q6P996 788 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 DTHD1Q6ZMT9 781 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 SRBD1Q8N5C6 995 aaKnown RBP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 SPATA5Q8NB90 893 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 MICAL1Q8TDZ2 1067 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 PARD3BQ8TEW8 1205 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 ESR2Q92731 530 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 ACSBG1Q96GR2 724 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 ZNF317Q96PQ6 595 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 ZSCAN10Q96SZ4 725 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 PSMD1Q99460 953 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 GREM2Q9H772 168 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 MEGF6O75095 1541 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 DIAPH2O60879 1101 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 PDE8BO95263 885 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 GSTA1P08263 222 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 UQCRFS1P1P0C7P4 283 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 UBA7P41226 1012 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 ZC3H6P61129 1189 aaKnown RBP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 KRT71Q3SY84 523 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 FAM133BQ5BKY9 247 aaKnown RBP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 IFIT1BQ5T764 474 aaKnown RBP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 TMTC3Q6ZXV5 915 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 STAG2Q8N3U4 1231 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 MIGA1Q8NAN2 632 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 CCHCR1Q8TD31 782 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 SCFD2Q8WU76 684 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 FAM129AQ9BZQ8 928 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 TMEM60Q9H2L4 133 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 KCNMB3Q9NPA1 279 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC171-208ENST00000486641 PCDHGC5Q9Y5F6 944 aa11.69□□□□□ -0.54
CCDC171-208ENST00000486641 CNTNAP5Q8WYK1 1306 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 BHMG1C9JSJ3 638 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-208ENST00000486641 SART1O43290 800 aaKnown RBP11.68□□□□□ -0.54
CCDC171-208ENST00000486641 SEMA3FQ13275 785 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 ZNF268Q14587 947 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-208ENST00000486641 AP1ARQ63HQ0 302 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 CACNA2D4Q7Z3S7 1137 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 PIGWQ7Z7B1 504 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 CCDC84Q86UT8 332 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-208ENST00000486641 ANKS4BQ8N8V4 417 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 CENPTQ96BT3 561 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 ZBTB10Q96DT7 871 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 AP1M1Q9BXS5 423 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 AGAP1Q9UPQ3 857 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 KCNK3O14649 394 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 IRF6O14896 467 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 TLR2O60603 784 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 GNAT2P19087 354 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms