RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 HAS1Q92839 578 aa18.71■□□□□ 0.59
THBS3-207ENST00000486260 KCNMB3Q9NPA1 279 aa18.71■□□□□ 0.59
THBS3-207ENST00000486260 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.71■□□□□ 0.59
THBS3-207ENST00000486260 LAD1O00515 517 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 MARCH6O60337 910 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 PPP6R2O75170 966 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 SEMA3FQ13275 785 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 ARHGEF6Q15052 776 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 IL17AQ16552 155 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 GNPTABQ3T906 1256 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 OLFML2BQ68BL8 750 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 FBXO16Q8IX29 292 aaPredicted RBP18.7■□□□□ 0.58
THBS3-207ENST00000486260 MSL3Q8N5Y2 521 aaKnown RBP18.7■□□□□ 0.58
THBS3-207ENST00000486260 GPRASP2Q96D09 838 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 PKD2L1Q9P0L9 805 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 SYNGAP1Q96PV0 1343 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 GNRH1P01148 92 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 TXKP42681 527 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 ME1P48163 572 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 ZNF577Q9BSK1 485 aa18.7■□□□□ 0.58
THBS3-207ENST00000486260 AGO4Q9HCK5 861 aaKnown RBP18.7■□□□□ 0.58
THBS3-207ENST00000486260 FBXO2Q9UK22 296 aaPredicted RBP18.7■□□□□ 0.58
THBS3-207ENST00000486260 TBX3O15119 743 aa18.69■□□□□ 0.58
THBS3-207ENST00000486260 CYP2C19P33261 490 aa18.69■□□□□ 0.58
THBS3-207ENST00000486260 PRPHP41219 470 aa18.69■□□□□ 0.58
THBS3-207ENST00000486260 GRIN1Q05586 938 aa18.69■□□□□ 0.58
THBS3-207ENST00000486260 TPRNQ4KMQ1 711 aa18.69■□□□□ 0.58
THBS3-207ENST00000486260 ARL6IP4Q66PJ3 421 aaKnown RBP18.69■□□□□ 0.58
THBS3-207ENST00000486260 PCDHA7Q9UN72 937 aa18.69■□□□□ 0.58
THBS3-207ENST00000486260 MORC2Q9Y6X9 1032 aaPredicted RBP18.69■□□□□ 0.58
THBS3-207ENST00000486260 VWA3AA6NCI4 1184 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 SPATA31C2B4DYI2 1134 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 IPO5O00410 1097 aaKnown RBP18.68■□□□□ 0.58
THBS3-207ENST00000486260 FOXN1O15353 648 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 MAFGO15525 162 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 ATP9AO75110 1047 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 PRPF40AO75400 957 aaKnown RBP18.68■□□□□ 0.58
THBS3-207ENST00000486260 ELP1O95163 1332 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 IGHA2P01877 340 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 CSPP1Q1MSJ5 1256 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 KIAA1217Q5T5P2 1943 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 DTHD1Q6ZMT9 781 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 SLFN12Q8IYM2 578 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 KRI1Q8N9T8 703 aaKnown RBP18.68■□□□□ 0.58
THBS3-207ENST00000486260 TMEM87AQ8NBN3 555 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 SLC5A5Q92911 643 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 FAM20AQ96MK3 541 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 CLIC6Q96NY7 704 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 KATNBL1Q9H079 304 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 TTC12Q9H892 705 aaPredicted RBP18.68■□□□□ 0.58
THBS3-207ENST00000486260 PDGFCQ9NRA1 345 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 SRPRBQ9Y5M8 271 aaKnown RBP18.68■□□□□ 0.58
THBS3-207ENST00000486260 HTTP42858 3142 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 ICAM3P32942 547 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 TECP42680 631 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 IRF5Q13568 498 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 PRAMEF19Q5SWL8 479 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 TRIB2Q92519 343 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 FERMT2Q96AC1 680 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 CDHR1Q96JP9 859 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 ABHD16BQ9H3Z7 469 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 VTA1Q9NP79 307 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 TRIM17Q9Y577 477 aa18.68■□□□□ 0.58
THBS3-207ENST00000486260 SP2Q02086 613 aa18.67■□□□□ 0.58
THBS3-207ENST00000486260 ITGB3BPQ13352 177 aaPredicted RBP18.67■□□□□ 0.58
THBS3-207ENST00000486260 ACVR2BQ13705 512 aa18.67■□□□□ 0.58
THBS3-207ENST00000486260 AXDND1Q5T1B0 1012 aaPredicted RBP18.67■□□□□ 0.58
THBS3-207ENST00000486260 LRCH2Q5VUJ6 765 aa18.67■□□□□ 0.58
THBS3-207ENST00000486260 TAPT1Q6NXT6 567 aa18.67■□□□□ 0.58
THBS3-207ENST00000486260 OTOP1Q7RTM1 612 aa18.67■□□□□ 0.58
THBS3-207ENST00000486260 PCDHA12Q9UN75 941 aa18.67■□□□□ 0.58
THBS3-207ENST00000486260 CENPFP49454 3210 aa18.67■□□□□ 0.58
THBS3-207ENST00000486260 CASP8AP2Q9UKL3 1982 aa18.66■□□□□ 0.58
THBS3-207ENST00000486260 GOLGA6L22H0YM25 854 aa18.66■□□□□ 0.58
THBS3-207ENST00000486260 ARIH2O95376 493 aa18.66■□□□□ 0.58
THBS3-207ENST00000486260 HSPA1AP0DMV8 641 aaKnown RBP18.66■□□□□ 0.58
THBS3-207ENST00000486260 HSPA1BP0DMV9 641 aaKnown RBP18.66■□□□□ 0.58
THBS3-207ENST00000486260 HSPA8P11142 646 aaKnown RBP18.66■□□□□ 0.58
THBS3-207ENST00000486260 MCM4P33991 863 aa18.66■□□□□ 0.58
THBS3-207ENST00000486260 RAET1EQ8TD07 263 aa18.66■□□□□ 0.58
THBS3-207ENST00000486260 CSRNP2Q9H175 543 aa18.66■□□□□ 0.58
THBS3-207ENST00000486260 BCAS3Q9H6U6 928 aa18.66■□□□□ 0.58
THBS3-207ENST00000486260 ZHX1Q9UKY1 873 aaPredicted RBP18.66■□□□□ 0.58
THBS3-207ENST00000486260 DHX15O43143 795 aaKnown RBP18.65■□□□□ 0.58
THBS3-207ENST00000486260 GAS7O60861 476 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 CUTAO60888 179 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 GADD45BO75293 160 aaPredicted RBP18.65■□□□□ 0.58
THBS3-207ENST00000486260 PSMD10O75832 226 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 ELNP15502 786 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 KCNA2P16389 499 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 SPECC1Q5M775 1068 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 TMEM63BQ5T3F8 832 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 DDX39AO00148 427 aaKnown RBP18.65■□□□□ 0.58
THBS3-207ENST00000486260 ADCY3O60266 1144 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 SORBS3O60504 671 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 TGFB3P10600 412 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 FXR2P51116 673 aaKnown RBP eCLIP18.65■□□□□ 0.58
THBS3-207ENST00000486260 PRMT2P55345 433 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 LY6KQ17RY6 165 aa18.65■□□□□ 0.58
THBS3-207ENST00000486260 TMEM266Q2M3C6 531 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms