RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 CNMDO75829 334 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 CTDNEP1O95476 244 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 IFNAR1P17181 557 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 ITGB7P26010 798 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 STAT3P40763 770 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 GCLCP48506 637 aaPredicted RBP6.49□□□□□ -1.37
COPS3-208ENST00000486032 ERVK-9P63128 1117 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 ERVK-24P63145 666 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 GUCY1B3Q02153 619 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 GAS6Q14393 721 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 BECN1Q14457 450 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 PPP2R5BQ15173 497 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 LBX2Q6XYB7 198 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 NSUN7Q8NE18 718 aaKnown RBP6.49□□□□□ -1.37
COPS3-208ENST00000486032 GTF3C2Q8WUA4 911 aaPredicted RBP6.49□□□□□ -1.37
COPS3-208ENST00000486032 SNX21Q969T3 373 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 AIFM3Q96NN9 605 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 SPZ1Q9BXG8 430 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 AMNQ9BXJ7 453 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 MOV10L1Q9BXT6 1211 aaKnown RBP6.49□□□□□ -1.37
COPS3-208ENST00000486032 MCOLN1Q9GZU1 580 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 RANBP17Q9H2T7 1088 aaKnown RBP6.49□□□□□ -1.37
COPS3-208ENST00000486032 RIOX1Q9H6W3 641 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 SLC38A10Q9HBR0 1119 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 ZCCHC17Q9NP64 241 aaKnown RBP6.49□□□□□ -1.37
COPS3-208ENST00000486032 PRDM10Q9NQV6 1147 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 RNF146Q9NTX7 359 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 SMC3Q9UQE7 1217 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 RABGAP1Q9Y3P9 1069 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 RBM19Q9Y4C8 960 aaKnown RBP6.49□□□□□ -1.37
COPS3-208ENST00000486032 PCDHA1Q9Y5I3 950 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 MYPNQ86TC9 1320 aa6.49□□□□□ -1.37
COPS3-208ENST00000486032 MYH6P13533 1939 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 CENPFP49454 3210 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 PARP14Q460N5 1801 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 A0A0G2JMZ2 1700 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 PNMA6FA0A0J9YX94 578 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 ZBTB5O15062 677 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 PRPF3O43395 683 aaKnown RBP6.48□□□□□ -1.37
COPS3-208ENST00000486032 PLA2G6O60733 806 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 PPP1R11O60927 126 aaPredicted RBP6.48□□□□□ -1.37
COPS3-208ENST00000486032 FDX1P10109 184 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 SCG2P13521 617 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 ERCC3P19447 782 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 GJB2P29033 226 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 RCAN1P53805 252 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 NAPAP54920 295 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 CCNA1P78396 465 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 KIF22Q14807 665 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 NTRK3Q16288 839 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 MUM1L1Q5H9M0 696 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 WWC2Q6AWC2 1192 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 C17orf99Q6UX52 265 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 NSMFQ6X4W1 530 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 TNS4Q8IZW8 715 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 MB21D1Q8N884 522 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 REPS2Q8NFH8 660 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 TRERF1Q96PN7 1200 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 MMP19Q99542 508 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 ALG1Q9BT22 464 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 TEX13BQ9BXU2 312 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 RNF26Q9BY78 433 aaPredicted RBP6.48□□□□□ -1.37
COPS3-208ENST00000486032 SPATC1LQ9H0A9 340 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 PORCNQ9H237 461 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 GJB4Q9NTQ9 266 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 SAGE1Q9NXZ1 904 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 VPS54Q9P1Q0 977 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 ZNF214Q9UL59 606 aaPredicted RBP6.48□□□□□ -1.37
COPS3-208ENST00000486032 KCNJ14Q9UNX9 436 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 RIPK3Q9Y572 518 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.48□□□□□ -1.37
COPS3-208ENST00000486032 ZNF536O15090 1300 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 ABCB11O95342 1321 aa6.48□□□□□ -1.37
COPS3-208ENST00000486032 MGAMO43451 1857 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 NID2Q14112 1375 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 SMCO2A6NFE2 343 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 NFIBO00712 420 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 TNPO2O14787 897 aaKnown RBP6.47□□□□□ -1.37
COPS3-208ENST00000486032 DEXIO95424 95 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 SLC25A27O95847 323 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 CFBP00751 764 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 ICAM1P05362 532 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 FDPSP14324 419 aaKnown RBP6.47□□□□□ -1.37
COPS3-208ENST00000486032 CALML3P27482 149 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 SMARCA1P28370 1054 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 PSMC4P43686 418 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 NLRP5P59047 1200 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 SP3Q02447 781 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 TRIM29Q14134 588 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 PKN1Q16512 942 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 UBE2SQ16763 222 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 PFKFB3Q16875 520 aaPredicted RBP6.47□□□□□ -1.37
COPS3-208ENST00000486032 FAM110CQ1W6H9 321 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 ANKRD35Q8N283 1001 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 IL27Q8NEV9 243 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 WASF1Q92558 559 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 TBC1D5Q92609 795 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 MTMR8Q96EF0 704 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 CFHR5Q9BXR6 569 aa6.47□□□□□ -1.37
COPS3-208ENST00000486032 SEMA6BQ9H3T3 888 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms