RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 SORBS3O60504 671 aa19.83■□□□□ 0.77
SMC4-216ENST00000485645 SELPP16109 830 aa19.83■□□□□ 0.77
SMC4-216ENST00000485645 KIF5BP33176 963 aa19.83■□□□□ 0.77
SMC4-216ENST00000485645 HSDL1Q3SXM5 330 aa19.83■□□□□ 0.77
SMC4-216ENST00000485645 TET1Q8NFU7 2136 aa19.83■□□□□ 0.77
SMC4-216ENST00000485645 SYMPKQ92797 1274 aaKnown RBP19.83■□□□□ 0.77
SMC4-216ENST00000485645 ZFP91Q96JP5 570 aaPredicted RBP19.83■□□□□ 0.77
SMC4-216ENST00000485645 MTA3Q9BTC8 594 aa19.83■□□□□ 0.77
SMC4-216ENST00000485645 LY9Q9HBG7 655 aa19.83■□□□□ 0.77
SMC4-216ENST00000485645 DDAH1O94760 285 aa19.82■□□□□ 0.76
SMC4-216ENST00000485645 BAIAP3O94812 1187 aa19.82■□□□□ 0.76
SMC4-216ENST00000485645 PARNO95453 639 aaKnown RBP19.82■□□□□ 0.76
SMC4-216ENST00000485645 HOXD8P13378 290 aaPredicted RBP19.82■□□□□ 0.76
SMC4-216ENST00000485645 UBA1P22314 1058 aaKnown RBP19.82■□□□□ 0.76
SMC4-216ENST00000485645 SP2Q02086 613 aa19.82■□□□□ 0.76
SMC4-216ENST00000485645 RBL2Q08999 1139 aa19.82■□□□□ 0.76
SMC4-216ENST00000485645 LRRC8DQ7L1W4 858 aa19.82■□□□□ 0.76
SMC4-216ENST00000485645 ZNF654Q8IZM8 581 aa19.82■□□□□ 0.76
SMC4-216ENST00000485645 DHX38Q92620 1227 aaKnown RBP19.82■□□□□ 0.76
SMC4-216ENST00000485645 MLXIPQ9HAP2 919 aa19.82■□□□□ 0.76
SMC4-216ENST00000485645 KIF28PB7ZC32 967 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 PRC1O43663 620 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 CKBP12277 381 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 SMARCA1P28370 1054 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 MCM5P33992 734 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 PTK7Q13308 1070 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 GNPTABQ3T906 1256 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 TMTC2Q8N394 836 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 GPKOWQ92917 476 aaPredicted RBP eCLIP19.81■□□□□ 0.764e-13■□□□□ 10.3
SMC4-216ENST00000485645 RRP36Q96EU6 259 aaKnown RBP19.81■□□□□ 0.76
SMC4-216ENST00000485645 MYL10Q9BUA6 226 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 SPZ1Q9BXG8 430 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 LSG1Q9H089 658 aaKnown RBP19.81■□□□□ 0.76
SMC4-216ENST00000485645 PRDM6Q9NQX0 595 aa19.81■□□□□ 0.76
SMC4-216ENST00000485645 STAM2O75886 525 aa19.8■□□□□ 0.76
SMC4-216ENST00000485645 CA3P07451 260 aa19.8■□□□□ 0.76
SMC4-216ENST00000485645 KCNJ6P48051 423 aa19.8■□□□□ 0.76
SMC4-216ENST00000485645 CCDC85BQ15834 202 aaPredicted RBP19.8■□□□□ 0.76
SMC4-216ENST00000485645 TJAP1Q5JTD0 557 aa19.8■□□□□ 0.76
SMC4-216ENST00000485645 NFXL1Q6ZNB6 911 aa19.8■□□□□ 0.76
SMC4-216ENST00000485645 HERC6Q8IVU3 1022 aa19.8■□□□□ 0.76
SMC4-216ENST00000485645 TMEM87BQ96K49 555 aa19.8■□□□□ 0.76
SMC4-216ENST00000485645 LZTS2Q9BRK4 669 aa19.8■□□□□ 0.76
SMC4-216ENST00000485645 CHD7Q9P2D1 2997 aa19.8■□□□□ 0.76
SMC4-216ENST00000485645 SEC63Q9UGP8 760 aaKnown RBP19.8■□□□□ 0.76
SMC4-216ENST00000485645 CCDC69A6NI79 296 aa19.79■□□□□ 0.76
SMC4-216ENST00000485645 GNAQP50148 359 aa19.79■□□□□ 0.76
SMC4-216ENST00000485645 ZNF200P98182 395 aaPredicted RBP19.79■□□□□ 0.76
SMC4-216ENST00000485645 GPNMBQ14956 572 aa19.79■□□□□ 0.76
SMC4-216ENST00000485645 SMARCC2Q8TAQ2 1214 aa19.79■□□□□ 0.76
SMC4-216ENST00000485645 CUL5Q93034 780 aa19.79■□□□□ 0.76
SMC4-216ENST00000485645 INPP4AQ96PE3 977 aaPredicted RBP19.79■□□□□ 0.76
SMC4-216ENST00000485645 ESYT1Q9BSJ8 1104 aa19.79■□□□□ 0.76
SMC4-216ENST00000485645 FRMPD4Q14CM0 1322 aa19.78■□□□□ 0.76
SMC4-216ENST00000485645 SH2B2O14492 632 aaPredicted RBP19.78■□□□□ 0.76
SMC4-216ENST00000485645 SLC27A2O14975 620 aa19.78■□□□□ 0.76
SMC4-216ENST00000485645 CXCL10P02778 98 aa19.78■□□□□ 0.76
SMC4-216ENST00000485645 ICAM3P32942 547 aa19.78■□□□□ 0.76
SMC4-216ENST00000485645 MRPS9P82933 396 aaKnown RBP19.78■□□□□ 0.76
SMC4-216ENST00000485645 NEDD9Q14511 834 aa19.78■□□□□ 0.76
SMC4-216ENST00000485645 CNKSR3Q6P9H4 555 aa19.78■□□□□ 0.76
SMC4-216ENST00000485645 ATXN2LQ8WWM7 1075 aaKnown RBP19.78■□□□□ 0.76
SMC4-216ENST00000485645 C16orf70Q9BSU1 422 aa19.78■□□□□ 0.76
SMC4-216ENST00000485645 RTEL1Q9NZ71 1219 aa19.78■□□□□ 0.76
SMC4-216ENST00000485645 THEGQ9P2T0 379 aa19.78■□□□□ 0.76
SMC4-216ENST00000485645 SPTBN5Q9NRC6 3674 aaKnown RBP19.78■□□□□ 0.76
SMC4-216ENST00000485645 SPATA31C2B4DYI2 1134 aa19.77■□□□□ 0.76
SMC4-216ENST00000485645 H3BRB1 525 aa19.77■□□□□ 0.76
SMC4-216ENST00000485645 NOP56O00567 594 aaKnown RBP19.77■□□□□ 0.76
SMC4-216ENST00000485645 NBNO60934 754 aa19.77■□□□□ 0.76
SMC4-216ENST00000485645 CALM1P0DP23 149 aa19.77■□□□□ 0.76
SMC4-216ENST00000485645 CALM2P0DP24 149 aa19.77■□□□□ 0.76
SMC4-216ENST00000485645 CALM3P0DP25 149 aa19.77■□□□□ 0.76
SMC4-216ENST00000485645 LIFRP42702 1097 aa19.77■□□□□ 0.76
SMC4-216ENST00000485645 WDR5P61964 334 aaKnown RBP19.77■□□□□ 0.76
SMC4-216ENST00000485645 TRIM71Q2Q1W2 868 aaKnown RBP19.77■□□□□ 0.76
SMC4-216ENST00000485645 CREB3L3Q68CJ9 461 aa19.77■□□□□ 0.76
SMC4-216ENST00000485645 USP17L6PQ6QN14 398 aa19.77■□□□□ 0.76
SMC4-216ENST00000485645 TUT1Q9H6E5 874 aaKnown RBP19.77■□□□□ 0.76
SMC4-216ENST00000485645 CERS4Q9HA82 394 aa19.77■□□□□ 0.76
SMC4-216ENST00000485645 C17orf102A2RUQ5 167 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 PIK3CDO00329 1044 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 FIBPO43427 364 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 TLL1O43897 1013 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 PLEKHA8P1O95397 391 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 HIC1Q14526 733 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 ZNF618Q5T7W0 954 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 XRRA1Q6P2D8 792 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 METTL7BQ6UX53 244 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 CYFIP1Q7L576 1253 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 SRBD1Q8N5C6 995 aaKnown RBP19.76■□□□□ 0.75
SMC4-216ENST00000485645 WNT8BQ93098 351 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 USP26Q9BXU7 913 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 BCAS3Q9H6U6 928 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 ANO2Q9NQ90 1003 aa19.76■□□□□ 0.75
SMC4-216ENST00000485645 TTC28Q96AY4 2481 aa19.75■□□□□ 0.75
SMC4-216ENST00000485645 ABHD14A-ACY1A0A1B0GW23 586 aa19.75■□□□□ 0.75
SMC4-216ENST00000485645 MEIS2O14770 477 aa19.75■□□□□ 0.75
SMC4-216ENST00000485645 EFCAB14O75071 495 aa19.75■□□□□ 0.75
SMC4-216ENST00000485645 LGALS2P05162 132 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms