RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	TAAR1	Q96RJ0	339 aa		12.34	□□□□□ -0.43
HMGN1-215	ENST00000485550	UBAC1	Q9BSL1	405 aa		12.34	□□□□□ -0.43
HMGN1-215	ENST00000485550	ZBED2	Q9BTP6	218 aa		12.34	□□□□□ -0.43
HMGN1-215	ENST00000485550	KRT23	Q9C075	422 aa		12.34	□□□□□ -0.43
HMGN1-215	ENST00000485550	GPHN	Q9NQX3	736 aa	Predicted RBP	12.34	□□□□□ -0.43
HMGN1-215	ENST00000485550	LMCD1	Q9NZU5	365 aa		12.34	□□□□□ -0.43
HMGN1-215	ENST00000485550	PNMA2	Q9UL42	364 aa		12.34	□□□□□ -0.43
HMGN1-215	ENST00000485550	KIAA1217	Q5T5P2	1943 aa		12.34	□□□□□ -0.43
HMGN1-215	ENST00000485550	MYH6	P13533	1939 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	RBM47	A0AV96	593 aa	Known RBP	12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	TXN	P10599	105 aa	Known RBP	12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	WDR5	P61964	334 aa	Known RBP	12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	DEFB103A	P81534	67 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	PPP2R5B	Q15173	497 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	QRICH1	Q2TAL8	776 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	LEXM	Q3ZCV2	418 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	ASPRV1	Q53RT3	343 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	IFIT1B	Q5T764	474 aa	Known RBP	12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	TTC22	Q5TAA0	569 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	CYB5R4	Q7L1T6	521 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	DNER	Q8NFT8	737 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	SNX27	Q96L92	541 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	MPHOSPH6	Q99547	160 aa	Known RBP	12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	MTG1	Q9BT17	334 aa	Predicted RBP	12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	JMJD4	Q9H9V9	463 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	SUGCT	Q9HAC7	445 aa		12.33	□□□□□ -0.44
HMGN1-215	ENST00000485550	LOC102724159	A0A0B4J2E5	919 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	BAIAP3	O94812	1187 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	ARIH2	O95376	493 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	ALAD	P13716	330 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	EDNRB	P24530	442 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	CPT1A	P50416	773 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	PTH1R	Q03431	593 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	BFSP2	Q13515	415 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	PWP2	Q15269	919 aa	Known RBP	12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	SEPT14	Q6ZU15	432 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	FBXO11	Q86XK2	927 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	RGS22	Q8NE09	1264 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	SCFD2	Q8WU76	684 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	CNNM2	Q9H8M5	875 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	COL20A1	Q9P218	1284 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	NOD1	Q9Y239	953 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	ABCB11	O95342	1321 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550	TECTA	O75443	2155 aa		12.32	□□□□□ -0.44
HMGN1-215	ENST00000485550		B4DLN1	442 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	CFB	P00751	764 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	CHML	P26374	656 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	NT5C2	P49902	561 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	MRPL12	P52815	198 aa	Known RBP	12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	LY6K	Q17RY6	165 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	FAM117B	Q6P1L5	589 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	NFRKB	Q6P4R8	1299 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	CHST3	Q7LGC8	479 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	MCF2L2	Q86YR7	1114 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	TGS1	Q96RS0	853 aa	Known RBP	12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	RMDN3	Q96TC7	470 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	MRPL11	Q9Y3B7	192 aa	Known RBP	12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	C5orf42	Q9H799	3197 aa		12.31	□□□□□ -0.44
HMGN1-215	ENST00000485550	LINC01553	A4QN01	128 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	GRXCR2	A6NFK2	248 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	KLRF2	D3W0D1	207 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	NKRF	O15226	690 aa	Known RBP eCLIP	12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	CYP21A2	P08686	494 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	EIF2AK2	P19525	551 aa	Known RBP	12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	ERVK-21	P61565	698 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	TRDN	Q13061	729 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	GPNMB	Q14956	572 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	SEC23A	Q15436	765 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	TCTN1	Q2MV58	587 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	BRDT	Q58F21	947 aa	Predicted RBP	12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	ARHGEF16	Q5VV41	709 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	HOMER1	Q86YM7	354 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	NSUN6	Q8TEA1	469 aa	Known RBP	12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	RUFY2	Q8WXA3	655 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	SENP2	Q9HC62	589 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	TAF6L	Q9Y6J9	622 aa		12.3	□□□□□ -0.44
HMGN1-215	ENST00000485550	RALGAPA2	Q2PPJ7	1873 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	TRIO	O75962	3097 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550		A6NJR5	290 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550		H3BQ06	376 aa	Predicted RBP	12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	IFIT3	O14879	490 aa	Known RBP	12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	DCX	O43602	365 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	GJB5	O95377	273 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	STXBP2	Q15833	593 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	PTGIS	Q16647	500 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	EP400NL	Q6ZTU2	488 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	AFG1L	Q8WV93	481 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	ZFP91	Q96JP5	570 aa	Predicted RBP	12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	RAD9A	Q99638	391 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	AMN	Q9BXJ7	453 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	MAD2L2	Q9UI95	211 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	RAD50	Q92878	1312 aa		12.29	□□□□□ -0.44
HMGN1-215	ENST00000485550	OPLAH	O14841	1288 aa		12.28	□□□□□ -0.44
HMGN1-215	ENST00000485550	SORBS3	O60504	671 aa		12.28	□□□□□ -0.44
HMGN1-215	ENST00000485550	PPP1R11	O60927	126 aa	Predicted RBP	12.28	□□□□□ -0.44
HMGN1-215	ENST00000485550	GH1	P01241	217 aa		12.28	□□□□□ -0.44
HMGN1-215	ENST00000485550	NR3C2	P08235	984 aa		12.28	□□□□□ -0.44

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