RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 FAM209AQ5JX71 171 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 BEND3Q5T5X7 828 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 SCARA3Q6AZY7 606 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 OVOS1Q6IE37 1185 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 NLRC3Q7RTR2 1065 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 LRRTM3Q86VH5 581 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 LDHDQ86WU2 507 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 MICALL1Q8N3F8 863 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 SVOPQ8N4V2 548 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 MTMR8Q96EF0 704 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 GMCL1Q96IK5 515 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 EXOC2Q96KP1 924 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 CLUHP3Q96NS8 147 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 GPR101Q96P66 508 aaPredicted RBP6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 CRAMP1Q96RY5 1269 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 PLA2G12BQ9BX93 195 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 API5Q9BZZ5 524 aaKnown RBP6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 PCDHA4Q9UN74 947 aa6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 MRPS23Q9Y3D9 190 aaKnown RBP6.78□□□□□ -1.32
NHLRC3-205ENST00000485407 MKI67P46013 3256 aaKnown RBP6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 TRAV20A0A0B4J274 112 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 BBOX1O75936 387 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 ARHGEF15O94989 841 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 NME1P15531 152 aaKnown RBP6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 EIF2AK2P19525 551 aaKnown RBP6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 CHRNA5P30532 468 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 NEK2P51955 445 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 GPLD1P80108 840 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 ITKQ08881 620 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 STRN3Q13033 797 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 BRD3Q15059 726 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 DBN1Q16643 649 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 WIPI1Q5MNZ9 446 aaPredicted RBP6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 INTS3Q68E01 1043 aaKnown RBP6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 ADAMTSL4Q6UY14 1074 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 STRA8Q7Z7C7 330 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 KISS1RQ969F8 398 aaPredicted RBP6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 ATG4CQ96DT6 458 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 FAM89AQ96GI7 184 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 RBM17Q96I25 401 aaKnown RBP6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 CAPNS2Q96L46 248 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 ASPSCR1Q9BZE9 553 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 SLC5A4Q9NY91 659 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 ZIM2Q9NZV7 527 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 REV1Q9UBZ9 1251 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 HDAC5Q9UQL6 1122 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 CORINQ9Y5Q5 1042 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 MYH3P11055 1940 aa6.77□□□□□ -1.33
NHLRC3-205ENST00000485407 UTYO14607 1347 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 DNAJC25-GNG10A0A024R161 153 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 TRBV23-1A0A0A0MS06 115 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 SLC22A31A6NKX4 558 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 ZBTB42B2RXF5 422 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 ARAFP10398 606 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 PTPRAP18433 802 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 PLCG1P19174 1290 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 SDSP20132 328 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 MAP2K2P36507 400 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 CCT4P50991 539 aaKnown RBP6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 SRSF11Q05519 484 aaKnown RBP6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 CCDC152Q4G0S7 254 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 SYCP2LQ5T4T6 812 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 SLC4A10Q6U841 1118 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 ATF7IPQ6VMQ6 1270 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 VN1R5Q7Z5H4 357 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 WDR66Q8TBY9 1149 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 KLHL6Q8WZ60 621 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 RPGRQ92834 1020 aaKnown RBP6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 ZNF622Q969S3 477 aaKnown RBP eCLIP6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 SLC9A7Q96T83 725 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 ZC3H12CQ9C0D7 883 aaKnown RBP6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 ARNT2Q9HBZ2 717 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 AASDHPPTQ9NRN7 309 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 LRP2BPQ9P2M1 347 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 ABT1Q9ULW3 272 aaKnown RBP6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 NOB1Q9ULX3 412 aaKnown RBP6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 ABCC12Q96J65 1359 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 LAMB2P55268 1798 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 TIAM2Q8IVF5 1701 aa6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 DDX60Q8IY21 1712 aaKnown RBP6.76□□□□□ -1.33
NHLRC3-205ENST00000485407 RTL9Q8NET4 1388 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 A0A1W2PQU0 124 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 HMGB1P1B2RPK0 211 aaPredicted RBP6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 GRM8O00222 908 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 AKAP10O43572 662 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 LDHAP00338 332 aaKnown RBP6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 GSTP1P09211 210 aaKnown RBP6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 CD33P20138 364 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 AP3B2Q13367 1082 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 HSP90AA2PQ14568 343 aaPredicted RBP6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 YOD1Q5VVQ6 348 aaPredicted RBP6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 ZKSCAN2Q63HK3 967 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 HDXQ7Z353 690 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 PDZD3Q86UT5 571 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 RTKN2Q8IZC4 609 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 AHI1Q8N157 1196 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 PPM1KQ8N3J5 372 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 PPP1R14AQ96A00 147 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 EVI5LQ96CN4 794 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms