RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 GLIS3Q8NEA6 775 aa12.45□□□□□ -0.42
PEX1-208ENST00000484913 LPAR1Q92633 364 aa12.45□□□□□ -0.42
PEX1-208ENST00000484913 KLRG1Q96E93 195 aa12.45□□□□□ -0.42
PEX1-208ENST00000484913 MMTAG2Q9BU76 263 aaKnown RBP12.45□□□□□ -0.42
PEX1-208ENST00000484913 PANK4Q9NVE7 773 aa12.45□□□□□ -0.42
PEX1-208ENST00000484913 PPP1R9AQ9ULJ8 1098 aa12.45□□□□□ -0.42
PEX1-208ENST00000484913 IRF6O14896 467 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 TEX33O43247 280 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 TREML2Q5T2D2 321 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 TCERG1LQ5VWI1 586 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 MIER3Q7Z3K6 550 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 SLFN12Q8IYM2 578 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 ZBED3Q96IU2 234 aaPredicted RBP12.44□□□□□ -0.42
PEX1-208ENST00000484913 PNMA5Q96PV4 448 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 CCSER1Q9C0I3 900 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 KIAA1683Q9H0B3 1180 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 PRPHP41219 470 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 CCDC40Q4G0X9 1142 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 KCNF1Q9H3M0 494 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 QSER1Q2KHR3 1735 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 TMEM150BA6NC51 233 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 IPO5O00410 1097 aaKnown RBP12.44□□□□□ -0.42
PEX1-208ENST00000484913 OPLAHO14841 1288 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 ICAM1P05362 532 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 TPM1P09493 284 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 CEP55Q53EZ4 464 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 ZNF658Q5TYW1 1059 aaPredicted RBP12.44□□□□□ -0.42
PEX1-208ENST00000484913 RAD54LQ92698 747 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.44□□□□□ -0.423e-10■■■■■ 130.4
PEX1-208ENST00000484913 COL20A1Q9P218 1284 aa12.44□□□□□ -0.42
PEX1-208ENST00000484913 FAM13AO94988 1023 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 COG2Q14746 738 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 CDCA5Q96FF9 252 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 MTMR9Q96QG7 549 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 RANBP17Q9H2T7 1088 aaKnown RBP12.43□□□□□ -0.42
PEX1-208ENST00000484913 EML1O00423 815 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 USP11P51784 963 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 MCF2L2Q86YR7 1114 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 WDR18Q9BV38 432 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 MYH15Q9Y2K3 1946 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 KCNJ18B7U540 433 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 VWA5AO00534 786 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 PMS1P54277 932 aaKnown RBP12.43□□□□□ -0.42
PEX1-208ENST00000484913 MTMR1Q13613 665 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 KCNJ12Q14500 433 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 NOLC1Q14978 699 aaKnown RBP eCLIP12.43□□□□□ -0.42
PEX1-208ENST00000484913 SPATA1Q5VX52 437 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 PPP4R3AQ6IN85 833 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 CATSPER3Q86XQ3 398 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 TRIML1Q8N9V2 468 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 MTMR8Q96EF0 704 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 NAP1L4Q99733 375 aaKnown RBP12.43□□□□□ -0.42
PEX1-208ENST00000484913 EIF2AK1Q9BQI3 630 aaKnown RBP12.43□□□□□ -0.42
PEX1-208ENST00000484913 TEKT3Q9BXF9 490 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 RABGAP1Q9Y3P9 1069 aa12.43□□□□□ -0.42
PEX1-208ENST00000484913 USP2O75604 605 aaPredicted RBP12.42□□□□□ -0.42
PEX1-208ENST00000484913 GCNT3O95395 438 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 SREBF1P36956 1147 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 CNNM4Q6P4Q7 775 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 MYCT1Q8N699 235 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 SLC10A4Q96EP9 437 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 RSPH10B2B2RC85 870 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 USO1O60763 962 aaKnown RBP12.42□□□□□ -0.42
PEX1-208ENST00000484913 RSPH10BP0C881 870 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.42□□□□□ -0.42
PEX1-208ENST00000484913 KSR1Q8IVT5 923 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 IGSF22Q8N9C0 903 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 BCAS3Q9H6U6 928 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 MRPL44Q9H9J2 332 aaKnown RBP12.42□□□□□ -0.42
PEX1-208ENST00000484913 LTBP3Q9NS15 1303 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 FAM237AA0A1B0GTK4 181 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 ARHGEF35A5YM69 484 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 PPP1R3GB7ZBB8 358 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 FAM26FQ5R3K3 315 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 CCDC65Q8IXS2 484 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 RGS22Q8NE09 1264 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 NT5C3AQ9H0P0 336 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 BLOC1S4Q9NUP1 217 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 POLR2AP24928 1970 aaKnown RBP12.42□□□□□ -0.42
PEX1-208ENST00000484913 IKBKBO14920 756 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 CLK2P49760 499 aaKnown RBP12.42□□□□□ -0.42
PEX1-208ENST00000484913 CEP135Q66GS9 1140 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 BTNL9Q6UXG8 535 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 RDH13Q8NBN7 331 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 RRAGCQ9HB90 399 aa12.42□□□□□ -0.42
PEX1-208ENST00000484913 PCNTO95613 3336 aa12.41□□□□□ -0.42
PEX1-208ENST00000484913 EDIL3O43854 480 aa12.41□□□□□ -0.42
PEX1-208ENST00000484913 PRPF6O94906 941 aaKnown RBP12.41□□□□□ -0.42
PEX1-208ENST00000484913 ENOX1Q8TC92 643 aaKnown RBP12.41□□□□□ -0.42
PEX1-208ENST00000484913 SYTL5Q8TDW5 730 aaPredicted RBP12.41□□□□□ -0.42
PEX1-208ENST00000484913 MRFAP1L1Q96HT8 127 aa12.41□□□□□ -0.42
PEX1-208ENST00000484913 TSG101Q99816 390 aa12.41□□□□□ -0.42
PEX1-208ENST00000484913 KCNH7Q9NS40 1196 aa12.41□□□□□ -0.42
PEX1-208ENST00000484913 KDM3AQ9Y4C1 1321 aa12.41□□□□□ -0.42
PEX1-208ENST00000484913 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
PEX1-208ENST00000484913 PGK2P07205 417 aa12.41□□□□□ -0.42
PEX1-208ENST00000484913 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
PEX1-208ENST00000484913 NLRX1Q86UT6 975 aa12.41□□□□□ -0.42
PEX1-208ENST00000484913 SYCP3Q8IZU3 236 aa12.41□□□□□ -0.42
PEX1-208ENST00000484913 CRACR2AQ9BSW2 395 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms